Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00275 ATGGCGAAGTATCATCGGAACAATGTCGGATCTCTGGTTCTCGACAGACACGGCGGTGGAAATTTCCGGATATGGTCGGCATTTTCCGGTGCTGCTTTCCGCCGGAAACTCTTCGATACCATGCGATGTGGCGTTTCCCGACACCGACATGAGGAAGAGTCTGATATGGGATCGATGGAGGAGAAGCAGCCGGAGAGAACAGAGGTGAAGAGGAATGGTGGATCGGAGAAGTTGTCTGAGCTTTTGAAGACTTCTCAAGCGTTGGAAGCTGAGGCGGAGGTGGTGGCGGAGGCGGAAGCGGAGGTTGAGACGAGGAGGAAGCTTGAAGTGTTTGAAGAGCTTCAAGGAGTTGTGAAGAGATTGCAGTTTGAGGAAGGATCGAAGCAGATGGAGGCGGCAATGGATGTGAGGAGGCTTGCGAAGGAAGATTCGGATGCGAGAGCAACGCTCGCTATGCTTGGAGCGATTCCTCCTCTTGTTGGAATGCTTGATTCGACTGATCTTGATTTCCAGATCGCTTCGCTTTACGCTCTTCTCAATTTAGGGATCGGAAACGATACGAACAAAGCAGCCATTGTTGAAGCAGGAGCTGTTCACAAGATGCTGAAGCTCATTGAGTCTCTGGACCCGTCGGTGTCTGAAGCAATCGTCGCAAATTTCCTTGCCTTGAGTGCTCTGGACTCGAATAAGCCCATCATCGGTTCTTCCGGTGCAATTCCTTTCCTGGTAAAAACCCTTCAAAATGTAGACAAGAGAAGCAGTGCGCAAGCGAAACAAGACTCTCTCAGAGCAATCTACAACCTCTCAATTTTCCCCTCAAACACCTCCCAAATTCTAGAAACCAATCTCGTCCCCTTCCTCCTGAACACGCTTGGCGACATGGAAGTTAGTGAAAGAATCCTCTCGATCCTCAGCAATGTAGTTTCAAACACAGTAGGACGGAAAGCTATTAGCAATTCAGCCGATTCCATCCCAATTTTGGTCGATGTATTGAATTGGACTGATTCACCTGGTTGTCAGGAGAAGGCATCCTACATTCTAATGGTAATGGCACACAAGTCCTACGGAGATCGGCAAGCGATGATCGAAGCAGGAATTACGTCGTCCCTACTTGAATTAACACTCCTCGGCAGTACATTAGCACAGAAGAGAGCCTCCAGGATCTTGGAGTGTTTGAGAGTGGATAAAGGAAAGCAAGTTTCAGAGGGTTATGGTGGTGGGGGTTTGGTTGCAGCTGTTTCAGCTCCAATTTGTGGCTCTTCATCTTCGACCGGGGCGAACCAGGATTTAAAACAGGGGTTGGAGGAAGAAGAAGAAGACATGATTAGTGAAGAGAGAAAGGCAGTGAAGCAATTGGTGCAACAGAGCTTACAGAACAACATGAGAAGGATTGTAAAGAGAGCAAATTTGCCACACGATTTCGTTCCTTCTGATCATTTCAAGTCACTCACTACAACTTCTACTTCCAAGAGCTTACCATTCTGA 1485 0.4808 MAKYHRNNVGSLVLDRHGGGNFRIWSAFSGAAFRRKLFDTMRCGVSRHRHEEESDMGSMEEKQPERTEVKRNGGSEKLSELLKTSQALEAEAEVVAEAEAEVETRRKLEVFEELQGVVKRLQFEEGSKQMEAAMDVRRLAKEDSDARATLAMLGAIPPLVGMLDSTDLDFQIASLYALLNLGIGNDTNKAAIVEAGAVHKMLKLIESLDPSVSEAIVANFLALSALDSNKPIIGSSGAIPFLVKTLQNVDKRSSAQAKQDSLRAIYNLSIFPSNTSQILETNLVPFLLNTLGDMEVSERILSILSNVVSNTVGRKAISNSADSIPILVDVLNWTDSPGCQEKASYILMVMAHKSYGDRQAMIEAGITSSLLELTLLGSTLAQKRASRILECLRVDKGKQVSEGYGGGGLVAAVSAPICGSSSSTGANQDLKQGLEEEEEDMISEERKAVKQLVQQSLQNNMRRIVKRANLPHDFVPSDHFKSLTTTSTSKSLPF* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00275 494 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 494 - -
Eupl10g00275 494 SMART arm_5 226 270 IPR000225 GO:0005515
Eupl10g00275 494 SMART arm_5 185 225 IPR000225 GO:0005515
Eupl10g00275 494 SMART arm_5 143 183 IPR000225 GO:0005515
Eupl10g00275 494 SMART arm_5 271 309 IPR000225 GO:0005515
Eupl10g00275 494 Pfam Armadillo/beta-catenin-like repeat 144 181 IPR000225 GO:0005515
Eupl10g00275 494 SUPERFAMILY ARM repeat 113 395 IPR016024 -
Eupl10g00275 494 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 154 196 IPR000225 GO:0005515
Eupl10g00275 494 Gene3D - 249 402 IPR011989 -
Eupl10g00275 494 Gene3D - 113 246 IPR011989 -
Eupl10g00275 494 MobiDBLite consensus disorder prediction 46 76 - -
Eupl10g00275 494 Coils Coil 427 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00275 Eupl-Chr10 16966225 16969171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00275 113 390 U-box Gene Family AT3G46510 34.859 2.43e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00275 - - nnu:104610709 690.649