Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00271 ATGCAGCCTTGTGGTAGAGAAATGCAAGGAATGGCTTCCATAACGGCTTGTTTGAACTCCTCTCAAATTGCTATTCAGGAGCTTCAAAACGGCCAACAACAACAACAACAGATCCTAAACCCTCAGATTCAGGTTCAGGCTTCTCACTTCGATCAAGCTTCTCACGACGATTTCCTCGAACAAATGCTATCCAGTATTCCTTCCTGGCCTGAGCTCCCTGGAAACCCTAAATCTCCTTGGGACCTCGGCTCCCAAAACCCTAACGGGAACACCAACATCAACGGCAATCATCAGAAGCTCTTCAATATCCATGGAAACAAAGCGAGAGATTTATCCGAAGATACGTCGTCATCGCAGCCGGAGAACCTCCAGTACCCGTTCGACGATTCGACTCTGCTTGCTTCGCGACTCCGGCAGCACCATATAAGCGGCAATTCTCCGAAATCGATGGTGCTTCAGCATCAGTTACTCCTTCCGAGGGGCGCCGCCGGTGGCGGCATGGCGAGATCCCCGTCGTCCACCTCTAGCGGCGTTACCTGTCTCGGCGGTGAGTCTGGGCTTCTCCCACTCCCTTTAACCCTCGGCAGCGGCGACTCCTCCGATGTCGTCGACGCTTCCTTCAAATCCTCAAATCCCAGTGGAGAGGGTTCAGTTCAAGGTCTCTATAACGGATTCAACGGATCTCTGCCTCGAACGGGACAGACATCAAACCAGCAGCATTTCCATCAACCTCAGAACTACGGAGCACCAGCGACGGGAATGAACCAACCCCCGGCAGCGGGACCTAGCGGAGGTGGTGGCGCAGCTCCAACACGTCAGAAAGTTAGAGCAAGAAGAGGCCAGGCGACCGATCCACACAGCATCGCTGAAAGATTACGGAGGGAGAGAATCGCGGAAAGAATGAAAGCTCTACAGGAACTGGTGCCCAATGCGAATAAGACGGACAAGGCTTCGATGCTGGACGAGATCATCGATTATGTTAAATTCCTCCAGCTTCAAGTTCTGAGCATGAGCAGGTTGGGCGGTGCAGCTGCTGTTGCTCCCCTCGTGGCTGATATCTCCTCTGAGGGAGGAGGTGACTGTATTCAAGCGAGTGGAGGAGGTGGTGGTGGTGGGGGCATGGGACGGAACAGTAACGGAACGCAAACGGGATCATCATCTAACGACAGCCTAACAGTCACGGAGCACCAAGTGGCGAAGCTTATGGAAGAGGACATGGGATCAGCCATGCAGTATCTCCAAGGGAAAGGTCTCTGCCTCATGCCTATATCTCTAGCCACCGCAATCTCAACTGCCACGTGTCACTCAAGGAACCCGAACAACAACAACAACAACAACATCAACAACCTCATTGCTTCAAACGCGGAGGGGCCTTCATCACCAAGCATGTCCGTCCTGACGGTACAATCAACAATGGGTAACGGAGGTGGGGAGACTTCCGTCAAAGACGCGACGTCAGTTTCGAAGCCGTGA 1473 0.5316 MQPCGREMQGMASITACLNSSQIAIQELQNGQQQQQQILNPQIQVQASHFDQASHDDFLEQMLSSIPSWPELPGNPKSPWDLGSQNPNGNTNINGNHQKLFNIHGNKARDLSEDTSSSQPENLQYPFDDSTLLASRLRQHHISGNSPKSMVLQHQLLLPRGAAGGGMARSPSSTSSGVTCLGGESGLLPLPLTLGSGDSSDVVDASFKSSNPSGEGSVQGLYNGFNGSLPRTGQTSNQQHFHQPQNYGAPATGMNQPPAAGPSGGGGAAPTRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLSMSRLGGAAAVAPLVADISSEGGGDCIQASGGGGGGGGMGRNSNGTQTGSSSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPNNNNNNNINNLIASNAEGPSSPSMSVLTVQSTMGNGGGETSVKDATSVSKP* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00271 490 SMART finulus 287 336 IPR011598 GO:0046983
Eupl10g00271 490 MobiDBLite consensus disorder prediction 203 252 - -
Eupl10g00271 490 MobiDBLite consensus disorder prediction 375 391 - -
Eupl10g00271 490 MobiDBLite consensus disorder prediction 437 490 - -
Eupl10g00271 490 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 279 338 IPR036638 GO:0046983
Eupl10g00271 490 Gene3D - 276 338 IPR036638 GO:0046983
Eupl10g00271 490 FunFam Transcription factor bHLH66 278 341 - -
Eupl10g00271 490 MobiDBLite consensus disorder prediction 79 98 - -
Eupl10g00271 490 MobiDBLite consensus disorder prediction 203 285 - -
Eupl10g00271 490 MobiDBLite consensus disorder prediction 365 391 - -
Eupl10g00271 490 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 123 429 - -
Eupl10g00271 490 MobiDBLite consensus disorder prediction 66 98 - -
Eupl10g00271 490 Pfam Helix-loop-helix DNA-binding domain 286 331 IPR011598 GO:0046983
Eupl10g00271 490 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 281 330 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00271 Eupl-Chr10 16792874 16796603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00271 259 489 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 63.241 3.01e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl10g00271 HLH 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00271 - - nnu:104610713 561.607