LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl10g00267	ATGGAGGACGAACATCATGGTAGTAATGGTTCGAGAAATCTTTTGTTCGGCAAGTATGAGATGGGGAGGCTGTTAGGGCAAGGGACCTTCGCGAAGGTTTACTATGGAAAACATCTGAAATCTGGAGAGAGCGTTGCGATCAAACTGATCAACAAAGATCTAGTCAAGAAGGAAGGATTGATGGAGCAGATAAAGCGAGAGATCTCTGTTATGCGTCTCGTTCGACACCCTAACGTCGTTGAACTCAAAGAAGTTATGGCGACAAAGGGGAAGATATACTTCGTGATGGAGTACGTTCGAGGCGGCGAGCTCTTCGCCAAAGTCGCCAAGGGGAAACTCAAGGAAGATCTGGCTCGTAAGTACTTTCAACAGTTGATCAGCGCCGTTGATTTCTGCCATAGCAGAGGCGTTTCTCACCGTGATCTCAAGCCCGAAAATCTACTTTTGGATGACAACGAAGATCTCAAGATCTCCGATTTTGGATTGTCTTCTCTTCCTGAACAGCTCCGCAACGATGGATTGCTTCACACTCAGTGTGGGACTCCAGCGTACGTCGCGCCTGAGGTATTGAGGAAGAAAGGCTACGACGGATCGAAAGCCGATATCTGGTCTTGTGGAGTGATTCTCTTTGTATTACTAGCTGGATTTCTTCCATTTCAAGATGAGAACATAATGAAGATGTATCGAAAGGTATTTAGAGCCGAATTCGAGTTTCCGCCTTGGTTTTCCTCGGAAACCAAGCGGCTGATCTCGAAATTACTTGTTGCTGATCCGGAGAAGAGACTTACAATCGCGGCGATAAAGCAAGTTCCTTGGTTCAAGAAAGGATTCACTCGACCGCTCGCGTTTTCGATCGAGGATTTTGCGCCGCATGAGAAGTTTGAAGAGGAGGATATCGATAAAGGAGGTGTTAGATCGAATCCATCGCCGCCTTTCTTTAATGCGTTCGAATTGATCTCATCGATGTCATCCGGATTCGATCTATCGAGCCTGTTCGAGAGCAAGAAAAAGGCCGGATCGATGTTCACGTCGAAGTGCTCGGCGTCGGCGATCATGTCGAAATTGGAATTGATGGCGAAGGGATTGAGATTTAAAGTGGAAAAGGTGAAGGAATTCAAAGTAAGGATGCAGGGAGCGGAGGAAGGGCGAAAAGGAAAGCTGTCAGTGACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCCATAGTTGAATTCTCGAAGTCCGCCGGCGACACGCTAGAATACGCCAAATTCTGCGAGGACGACGTTAGACCTGCTCTCAAAGACATTGTTTGGACTTGGCAAGGAGACAATAACAGTTGCGATAACAGTGATAACGGTAACGGTAACTGGAACGTAAACAATAACCCTAATTAG	1377	0.4742	MEDEHHGSNGSRNLLFGKYEMGRLLGQGTFAKVYYGKHLKSGESVAIKLINKDLVKKEGLMEQIKREISVMRLVRHPNVVELKEVMATKGKIYFVMEYVRGGELFAKVAKGKLKEDLARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDDNEDLKISDFGLSSLPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILFVLLAGFLPFQDENIMKMYRKVFRAEFEFPPWFSSETKRLISKLLVADPEKRLTIAAIKQVPWFKKGFTRPLAFSIEDFAPHEKFEEEDIDKGGVRSNPSPPFFNAFELISSMSSGFDLSSLFESKKKAGSMFTSKCSASAIMSKLELMAKGLRFKVEKVKEFKVRMQGAEEGRKGKLSVTAEVFEVAPEVAIVEFSKSAGDTLEYAKFCEDDVRPALKDIVWTWQGDNNSCDNSDNGNGNWNVNNNPN*	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl10g00267	458	ProSiteProfiles	Protein kinase domain profile.	19	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl10g00267	458	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	12	428	-	-
	Eupl10g00267	458	FunFam	Non-specific serine/threonine protein kinase	10	98	-	-
	Eupl10g00267	458	CDD	CIPK_C	314	428	-	-
	Eupl10g00267	458	Pfam	NAF domain	310	368	IPR004041	GO:0007165
	Eupl10g00267	458	SMART	serkin_6	19	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl10g00267	458	ProSiteProfiles	NAF domain profile.	308	333	IPR018451	GO:0007165
	Eupl10g00267	458	ProSitePatterns	Protein kinases ATP-binding region signature.	25	57	IPR017441	GO:0005524
	Eupl10g00267	458	FunFam	Non-specific serine/threonine protein kinase	308	432	-	-
	Eupl10g00267	458	Coils	Coil	47	67	-	-
	Eupl10g00267	458	Gene3D	Kinase associated domain 1, KA1	309	433	-	-
	Eupl10g00267	458	MobiDBLite	consensus disorder prediction	439	458	-	-
	Eupl10g00267	458	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	137	149	IPR008271	GO:0004672\|GO:0006468
	Eupl10g00267	458	FunFam	Non-specific serine/threonine protein kinase	12	303	-	-
	Eupl10g00267	458	SUPERFAMILY	Protein kinase-like (PK-like)	15	291	IPR011009	-
	Eupl10g00267	458	Gene3D	Transferase(Phosphotransferase) domain 1	11	308	-	-
	Eupl10g00267	458	CDD	STKc_SnRK3	18	272	-	-
	Eupl10g00267	458	Pfam	Protein kinase domain	19	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl10g00267	Eupl-Chr10	16526781	16528842	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl10g00267	1	456	CBL-interacting serine-threonine protein kinases	AT5G25110	68.043	0.0	646

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Eupl10g00267		Pkinase	6.5e-76	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl10g00267	-		-	msin:131216982	704.131