Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00264 ATGGATTCTCAAAATGATGTCTCCCATAGAGAAGAGGTGCAAGCTCTAAAAGGAGAGTTAGAGCGTTTATGCAAAGAGAATGAAAATCTTAGCTTGATGCTTGAGACGATGAGCAGTAACTACAAAATCCTTGAAGCTCATTTGCAAGGGAAGAAGATACCTGGAATGGGTAGCATTGTCCCGGAGAGTTGCTCGAGTCAGGATTCAAACAAGAGAGCGATGGACGAATCTATCAAAGCAAAAGCATCACAAGTATTTGTTAGAACTGATCCAAGGGATGATAGCTTGATAGTGAAAGATGGGTTTCAATGGAGGAAGTATGGACAAAAAATCACAAAAGATAATCCATCACCTCGAGCTTATTATAGGTGTTCCATGGCTCCAGGATGCCCGGTCAAGAAGAAGGTGCAGAGATGTTTGGAGGATTCGTCAATTCTCGTCGCAAGGTATGAAGGAGAGCATAACCATGCAAGTCTTGGTGGGCATGATGATTTTACGACTTCCCTAGATGGCATAGTCAAGGACTCGACTACCAAATTTCCTTCTTCTGTTCCTGTTAATCCTTTTCACCCAAGCATTGATCTAACTCTTTCAGGGGCTAATCAAGATAACGAGAGGCCCTTCCACAATTTCATGGAAGACACCAACAACAACAACCATATTGAAGAATACGTGGCTTCCCTAACGAAAGACCCTAACTTCACTGCAGCTTTAGCAGCTGCAGTTGCACGCACCATGACTGATCTTCCGAATTCAAACAAAATGTGA 768 0.4284 MDSQNDVSHREEVQALKGELERLCKENENLSLMLETMSSNYKILEAHLQGKKIPGMGSIVPESCSSQDSNKRAMDESIKAKASQVFVRTDPRDDSLIVKDGFQWRKYGQKITKDNPSPRAYYRCSMAPGCPVKKKVQRCLEDSSILVARYEGEHNHASLGGHDDFTTSLDGIVKDSTTKFPSSVPVNPFHPSIDLTLSGANQDNERPFHNFMEDTNNNNHIEEYVASLTKDPNFTAALAAAVARTMTDLPNSNKM* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00264 255 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 7 246 IPR044810 GO:0003700
Eupl10g00264 255 Gene3D WRKY domain 81 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl10g00264 255 Pfam WRKY DNA -binding domain 99 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00264 255 SMART WRKY_cls 98 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00264 255 Coils Coil 13 40 - -
Eupl10g00264 255 SUPERFAMILY WRKY DNA-binding domain 94 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl10g00264 255 ProSiteProfiles WRKY domain profile. 93 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00264 Eupl-Chr10 16421968 16423088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00264 15 242 WRKY Transcription Factor Family AT1G80840 39.015 5.94e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl10g00264 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00264 - - nnu:104603311 280.411