Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00260 ATGGCGTTGTTTCGGAAATTCTTCTACAGGAAGCCTCCTGATGGACTTCTTGAGATCTCCGAGAGAGTTTACGTGTTCGATTGCTGCTTTTCTACGGATGTTTTGGAAGAAGATGACTATAAGGTCTACATGGGAGGCATAGTAGCTAAACTCCGTGATCATTCCCCTGATGCTTCCTTCATGGTATTCAACTTTCGGGAGGGAGAGAGGCAAAGCCAGATTGCCAGCATATTGTCTGAGTACGATATGACTGTGATGGACTACCCTCGGCACTATGAAGGTTGCCCGTTACTCACAATGGAGATGATCCATCATTTTCTGAGATCGAGTGAAAGCTGGCTTTCACTTGGGAATCAGAACATGCTGTTAATGCACTGTGAACGAGGTGGGTGGCCAGTTTTGGCTTTTATGCTGGCTGGGCTCTTGATTTACAGTAAGCAGTACAGTGGGGAGCAGAAGACATTGGACATGATTTACAAGCAAGCGCCTCGTGAGCTTTTGCAGTTACTGTCACCGCTGAATCCACTGCCTTCGCAGCTGAGGTACCTGCAGTATGTCTCAAGGAGGAATGTCGGCTCAGAATGGCCTCCTTTGGATAGGGCGCTTACATTGGATTGCATTATTCTTAGAATTCTTCCTAACTTTGATGGAGAGGGAGGTTGCCGGCCAATATTTCGGATATATGGACAAGATCCTTTTATTGCTACCGATCAAACTCCCAAAGTTCTGTTCTCGACATCAAAGAAGAGCAAAACTGTTCGGCTTTACAAGCAGGCAGACTGTGAACTAGTTAAAATTGACATCCATTGCCATATTCAAGGTGATGTTGTGCTTGAGTGCATCAGCTTGGATGAAGATCTGGAACGTGAAGAGATGATGTTTCGGGTCATGTTCAACACAGCCTTCATTAGGTCAAATATTTTGATGCTTAACCGTGATGATATTGATATCTTATGGAATGCTAAGGATCGATATCCCAAGGACTTTAGAGCAGAGATTCTTCTTTCAGACATGGATGCTGCTGCTTCTCTTATTACGGTGGAGTTGCCTGGCGGCGAGGAGAAGGAAGGCCTTCCTATGGAGGCATTTGCCAAAGTTCAAGAGATCTTTAGCAATGTGGATTGGCTAGATCCAAAGGCAGATGCTGCACTAAATGAGCTTCAGAAAATATCTGCATCAAATATTCTCCAAGAAAAGATGGAGACTGGTTCTCTCCAGAATGCAGAAATGAGTTCTCTGTTGCCAGGTCCTGAACTTCAAGAGACACTGAAGCCGGCATCTGAAAATAACATCAAGAGCTCCACATCCATGGTTATGGAGAAACAGTCCATGCCCTCCCTTAAACCATCTTCACATTCAGATTCGTCCAAAAAGGCGGTTCAACCTCAAGAACTGCAAGTTGCACTTCAAAAACCTGCTAAATCTAAGATCATATCCCAACGAATACCTCAGTCTTCTCTGTCCAATCCGGTTTCTTGTAGTCATTCTCCGCAAGGGTCACCTGTGCCTAAGTCAAGATATCATAGTGCACCTTCAGCTCTTGGCATTACAGCTCTCTTGCAAGATCATGCTTCATATGGAACTGCAGAAGTCACTCATCCAGCTAAGACATCTCCACCTTCCTCCATTCCTTCAACTCCCACTGTTTCATGTTTGCCTAAAACAGTTGGGCCCAACATTATCTCAATTCCGTCACCACCTCCTCCACCTCCCACATTGCCACCTCCTTTGACAGCTTCTACGACAATATCTTCTGCAACTCCCCATCCTCCTCCTCCACCACCACCACCACCACCTCATCAGATGTCAGCTTCAAAACCGGATGGTGGTCATTCATCATCAGTTCCTCCTCCCCCACCAGCACTTGCATCTCTTTTCTCAGGTGGTACTATCAGCAATTCATTGCTGACTCCCCCTCCTCCTACGTTGCCTGTGACTGCTTCGTCAACTCTTCTCCTCCTCCTCCTCCACCTCTGCCTACGAAGAAGCCATCAGTTACAGTTTGTCCTCCTCCCCCACCTCTGCCTACGAAGAAGCCATCAGTTACAGTTTGTCCTCCTCCCCCTCCACCTCCTCCATTATGTTCTAGTCCTTCCCCAGGTCCTACTATTGGAACTTCAGCTCCACCGCCACCGCCTCCACCCAGTTTTGCATCAAAGCATCCTAATGGTCCCGCATCTCAAATATCTCCACACGTTCCACCGGTGCCCCCTCCTCCAGCTCCTTTTGCCAAGGGGGTTTCAAGGGCTGTTGGTGCTTCTCCACAGTCTCTTTCTGCAGGCAGTAATGGAGCTAGTTCTGCTGGACCTCCATTTCCTGCACCACCGTTTAGTGCTCCATTTGGTGCAAAGGGACGGGGCCTTTCACGTACTATAA 2376 0.4735 MALFRKFFYRKPPDGLLEISERVYVFDCCFSTDVLEEDDYKVYMGGIVAKLRDHSPDASFMVFNFREGERQSQIASILSEYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGNQNMLLMHCERGGWPVLAFMLAGLLIYSKQYSGEQKTLDMIYKQAPRELLQLLSPLNPLPSQLRYLQYVSRRNVGSEWPPLDRALTLDCIILRILPNFDGEGGCRPIFRIYGQDPFIATDQTPKVLFSTSKKSKTVRLYKQADCELVKIDIHCHIQGDVVLECISLDEDLEREEMMFRVMFNTAFIRSNILMLNRDDIDILWNAKDRYPKDFRAEILLSDMDAAASLITVELPGGEEKEGLPMEAFAKVQEIFSNVDWLDPKADAALNELQKISASNILQEKMETGSLQNAEMSSLLPGPELQETLKPASENNIKSSTSMVMEKQSMPSLKPSSHSDSSKKAVQPQELQVALQKPAKSKIISQRIPQSSLSNPVSCSHSPQGSPVPKSRYHSAPSALGITALLQDHASYGTAEVTHPAKTSPPSSIPSTPTVSCLPKTVGPNIISIPSPPPPPPTLPPPLTASTTISSATPHPPPPPPPPPPHQMSASKPDGGHSSSVPPPPPALASLFSGGTISNSLLTPPPPTLPVTASSTLLLLLLHLCLRRSHQLQFVLLPHLCLRRSHQLQFVLLPLHLLHYVLVLPQVLLLELQLHRHRLHPVLHQSILMVPHLKYLHTFHRCPLLQLLLPRGFQGLLVLLHSLFLQAVMELVLLDLHFLHHRLVLHLVQRDGAFHVL* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00260 791 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Eupl10g00260 791 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Eupl10g00260 791 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Eupl10g00260 791 MobiDBLite consensus disorder prediction 560 577 - -
Eupl10g00260 791 MobiDBLite consensus disorder prediction 529 623 - -
Eupl10g00260 791 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Eupl10g00260 791 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Eupl10g00260 791 MobiDBLite consensus disorder prediction 437 463 - -
Eupl10g00260 791 PANTHER FORMIN-J 1 648 - -
Eupl10g00260 791 SMART PTEN_C2_2 197 337 IPR014020 -
Eupl10g00260 791 MobiDBLite consensus disorder prediction 531 555 - -
Eupl10g00260 791 MobiDBLite consensus disorder prediction 437 509 - -
Eupl10g00260 791 MobiDBLite consensus disorder prediction 477 505 - -
Eupl10g00260 791 Gene3D - 196 341 - -
Eupl10g00260 791 MobiDBLite consensus disorder prediction 586 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00260 Eupl-Chr10 16316073 16323130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00260 1 594 FH2 protein (formin) Gene Family AT2G25050 59.801 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00260 - - ming:122073861 867.07