Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00259 ATGGCTTTGTCCATACCAACAGATGGGTCCCACCAGTTGGATGATATGGGTCAATGGACAACTTGCACATTGGATTTCAAGAAATTTCCATATGATGCTAGAGGTGAGTGCTTCGGTGCGGGTGCGACGATAGGTTCGAACCCGACTCAAGCTATGAATTCATGTTGTCACTCAGCTCTCCAACCTGTCTTCCAAGCAATGGCGATAAGAGCGAACCTATCTCGATCCATCTTCCTCGACGCGACTCAAGCGCAGGATTGTAGTGCCATGTTCCAAGGTCTCCACAATCTAACCAACATTTCTGACTGTAGAATCCAAGATTTCATTAGTTCTACTTCGAACGCATGCTCGAGAGACGTCAATTCGGTCATCGACGTACTTGGGCTCGAGACATACAATGGCCTTCGATCGAGTTGTCGAGACTTGTCGATGAGTAATTATAGTGATGATGCATGTTATAAATGTGTGGGATCATATAGGAGATCTGTGCAAGCTTTGGAAGAGAATAATGGAGGAGAAAGGGATGGTTCAAATGGGAGGGTGTGTGCAGAAGCTCTTCTTGTTAGTCTTGCAAGCTCTGATGTTGATTCTGTGAATTGGGTTCAAGGCCTTTTTTCTTGTTTATGGGATGAAATCCGGTCTTTTCTGGGCTCCAAGAAATTCCTTGCTGCCATTCTCGTCGCACTGTCATTGGCTATGCTAGCTCCGATTCTCTACAAGATAACACGAAAACGACTACAGTATGCGAGCGATAAAGAAATTGAAAATTTATCAGTTATAGTCCTGAAGAATGCACTAGAGGATGACTCCACAAACCCATTTAGCTGCTCTGGTCTATATATTTTCTCTCAAGATGAAATTGCCAGAGCTACTAATTACTTCAATAATTCTAATTTGATTGGAGAAGGGAGTCTAGGGCAAATGTACTTAGGAATAATGCCTAGTGGAATGAAAGTGGCAATTAAAAGGGTTAATGAAGGCAGGAAGCTTCATGGTTTTGTTGCTGAGATAAGTAAAATGGCAAAGATAAGGCATCCAAATTTAGTTAGTATATTAGGATACTGCGACAGAGGAGATCAATGCTTGGTTTACGAGTTATGCGTTAACGGTAATTTAGCAAAGTGGCTTCTCGCCGGCGACGTAAGGAACCCGGTCTTAACATGGGAGCAAAGGGTACAAATAGCGATCGGCATTGCACGAGGTTTATGGTTCCTGCACAACAACCCCTTGGAGAAGATGGTTCATGGTGATGTGAAGCTCACAAACATATTATTGGATGAGAGACTAGAAGCCAAAGTTTCAGACTTCGTCTTATCGAACCGCAAGTCGAAAGAGATCGATGGATTGGTTACTATAGCAAATGATGTTTTTGATTTTGGGGTTGTGTTGCTTCAACTTTCGACGGGGAGAAAGATCATCGATCTGAGTTCTTCCATGCCGCGGTCTCTAGTCAATGAGGCAAGGAATATCGTAACAAAAGGAGGAAATGTCCGTGCGTTGGTCGATCCACACCTAAACGGAGCATACAATACAACTACATTTCAAAGAATTTTATCTGTAGCCGTTCTTTGTACGACTCCGTCCGAACGCGAGCGACCAAACATGGAAGAAATTCTACAGAAGCTCCAAGACTGTCAGGGTTCCACTTGA 1650 0.4345 MALSIPTDGSHQLDDMGQWTTCTLDFKKFPYDARGECFGAGATIGSNPTQAMNSCCHSALQPVFQAMAIRANLSRSIFLDATQAQDCSAMFQGLHNLTNISDCRIQDFISSTSNACSRDVNSVIDVLGLETYNGLRSSCRDLSMSNYSDDACYKCVGSYRRSVQALEENNGGERDGSNGRVCAEALLVSLASSDVDSVNWVQGLFSCLWDEIRSFLGSKKFLAAILVALSLAMLAPILYKITRKRLQYASDKEIENLSVIVLKNALEDDSTNPFSCSGLYIFSQDEIARATNYFNNSNLIGEGSLGQMYLGIMPSGMKVAIKRVNEGRKLHGFVAEISKMAKIRHPNLVSILGYCDRGDQCLVYELCVNGNLAKWLLAGDVRNPVLTWEQRVQIAIGIARGLWFLHNNPLEKMVHGDVKLTNILLDERLEAKVSDFVLSNRKSKEIDGLVTIANDVFDFGVVLLQLSTGRKIIDLSSSMPRSLVNEARNIVTKGGNVRALVDPHLNGAYNTTTFQRILSVAVLCTTPSERERPNMEEILQKLQDCQGST* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00259 549 Pfam Protein tyrosine and serine/threonine kinase 297 442 IPR001245 GO:0004672|GO:0006468
Eupl10g00259 549 Gene3D Transferase(Phosphotransferase) domain 1 449 548 - -
Eupl10g00259 549 SMART serkin_6 294 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00259 549 Gene3D Phosphorylase Kinase; domain 1 264 366 - -
Eupl10g00259 549 SUPERFAMILY Protein kinase-like (PK-like) 271 542 IPR011009 -
Eupl10g00259 549 Gene3D Transferase(Phosphotransferase) domain 1 368 448 - -
Eupl10g00259 549 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 201 544 - -
Eupl10g00259 549 Pfam SPARK 20 173 IPR043891 -
Eupl10g00259 549 ProSiteProfiles Protein kinase domain profile. 294 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00259 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00259 Eupl-Chr10 16295106 16300193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00259 261 542 Strubbelig Receptor Gene Family AT4G22130 35.390 1.75e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Eupl10g00259 PK_Tyr_Ser-Thr 8.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00259 - - msin:131257538 606.29