Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00252 ATGAGTTTCATGTCTTTCACCCAAATGGGTTTTGGTTTCTTTGGTTTCATTCTGGTTCTCACACTGTTCTTTAGGCCTTTAGTTTCTCAAAAACCCAATACAGATGGGTTCTTTGTCTCTGATTTCTTGAGGAAAATGGGTGTAAGTGTAACCTCTTCAGACGATTACAACTCTGCTCCTGTTTGTTCTTGGCAAGGTGTGATCTGTGATACCCAACAAGAACATGTTATTGAGTTAGTAGCTTCAAGTCTGGGTCTCTCAGGTTTCATTCCTGAGACCACCATTGGAAAGCTTAGCAAGCTTCAAAATCTGGATCTGAGCAATAACAATATCACTGGTTTGTCGTCGGATTTCTGGAGTTTGGGAAGCAGTCTCAAGACCCTTAACCTCTCTTATAACCAAATTTCTGGTTTCCTTCCGAACAACATCGGTAATTTCGGTATACTGGAAAGCCTTGATCTTTCCTTCAACAATTTCTCTGGTGATATTCCTGCATCTTTGAGCTCTCTTTTGAGCCTACAAATTCTAAAACTCAATCGAAATGAGTTTGGGGGGAGCATCCCATCTGGGATTCTGCAATGTGGAAATCTGGAGTCAATTGATCTTTCATCGAATCGGCTTACTGGGACTGTTCCAGATGGTTTTGGGGTTGCATTTCCAAAGCTTAAGAGTTTGAACTTTGCTGAGAATGAGATTCATGGACAGTCTTCTGACTTCTTGGGGCTGAAATCCATCACTCATCTTAACATTTCCAGGAATTTGTTTCAGGGTTCTGTGATAGGTATGTTTCAGGAGCCACTGGAGGTTATTGACCTGAGCCAAAACCAGTTTCAAGGGCAAATCTCTCAGGTACATTTTAATTATAGCTTCAAGTTCAACTGGTCTCATTTGGTTTTTCTCGATGTGTCTTCGAATCAACTCAGCGGTGAATTCTTCCATGATTTGAATGAAACCCAGAATCTGAAACACCTTAATCTAGCTGACAATAGATTTTCTGAACATGAATTCCCCCAAATCAAAAATCTCACTAGTCTGGAATATCTCAATCTTTCGAGGACCAGTCTCATAGGGAAAATTCCCACTGAAATCTCACAGTTAGTTCGCTTGAGGACACTAGACCTTTCTGAAAACCATCTCACTGGCCAAATTCCTTATCTGGGTAACAGCAGTCTCCAAGTTCTAGACTTTTCGCTGAACAATTTAACTGGAGAGATACTATTTTCTCTACTAGAAAAACTACACCAGATGAAGAAATTCAACTTCTCTTACAACAACTTAACCCTCTGTGCTTCAGAGTTTTCCCCCCAAACCTTCCAGACTGCATTCATTGGATCACTAGAAAGTTGCCCAATTGCTGCGAATCCGGATCTCGTCAAAAGAATGACCACCAAACAACGTAAAGGACTCAAGCTTGCTCTGGCTATAACCCTCTCATTTGTATGTTTTCTGGTGGGGTTGCTCTTCCTAGCCTTTGGGTGCAGGAGGAAAACCAGAATGTGGGCAGTTAAGCAACTTTCACACAAAGAAGAAGTGAACATCTCGGGCCCCTTTTCATTCCAAACGGATTCAACCACTTGGGTTGCAGATGTTAAGCTCGCAAACTCAGTCCCTGTAGTAATTTTCGAGAAACCATTGCTGAATTTCACCTTTGTGGACCTCTTGTCAGCAACTTCGCATTTTGATCGAGGGACACTGTTGGCAGAAGGGAGATTTGGTCCAGTTTATAGAGGATTTCTACCTGGGGGAATCCATATAGCTGTGAAAGTTTTGGTCCATGGATCCACCATGACAGACCAGGAAGCTGCAAGGGAGCTCGAATATCTCGGTAGGATCAAACACCCCAATCTTGTCCCCTTGATGGGATATTGCTTAGCTGGGGATCAGAGGATTGCCATCTATGATTACATGGAGAATGGAAATTTGCAGAATTTACTCCATGATCTTCCTCTTGGTATCCAAACAACAGAGGATTGGACCACTGATACATTGCAAGAAGATCATACTAACGGAATTCAAAATGTTGGTTCTGAAGGGCTACTAACAACTTGGAGATTTAGACACAAAATTGCACTTGGCATGGCCCGTGCACTGGCTTTCCTTCACCATGGTTGCTCTCCACCGATAATTCACCGAGATGTTAAGGCTAGTAGCATTTATTTTGACTTGAATTTGGAGCCAAGACTCTCCGATTTTGGATTGGCTAAGATTTTTGGAAATGGTCTAGAGGATGAGATCTCTCGTGAGTCGCTGGGGTATGTGCCTCCAGAGTTTTTTGAGACAGATACTGGTTCCCCGACGCCAAAATCCGATGTTTTTGGATTTGGGGTTGTTCTATTTGAGCTTGTTACAGGAAAGAAACCCGTCGGAGATGATTATCCAGAGGAGAATGAATCCAGTTTGGTGAGTTGGGTGAGAGGATTAGTCAGAAAAAACCAAGGTTCGAGAGCCATTGATCCAAAGATCCGAGGAACAGGGCCAGAGACCCAAATGGAGGAGGCCCTGAGGATTGGATATCTATGCACAGCAGATCTGCCTACAAAGAGGCCGAGTATGCACCAGATAGTTGGGCTCCTAAAAGACATTGAACCTGTTGCCCATCAGTGA 2604 0.4301 MSFMSFTQMGFGFFGFILVLTLFFRPLVSQKPNTDGFFVSDFLRKMGVSVTSSDDYNSAPVCSWQGVICDTQQEHVIELVASSLGLSGFIPETTIGKLSKLQNLDLSNNNITGLSSDFWSLGSSLKTLNLSYNQISGFLPNNIGNFGILESLDLSFNNFSGDIPASLSSLLSLQILKLNRNEFGGSIPSGILQCGNLESIDLSSNRLTGTVPDGFGVAFPKLKSLNFAENEIHGQSSDFLGLKSITHLNISRNLFQGSVIGMFQEPLEVIDLSQNQFQGQISQVHFNYSFKFNWSHLVFLDVSSNQLSGEFFHDLNETQNLKHLNLADNRFSEHEFPQIKNLTSLEYLNLSRTSLIGKIPTEISQLVRLRTLDLSENHLTGQIPYLGNSSLQVLDFSLNNLTGEILFSLLEKLHQMKKFNFSYNNLTLCASEFSPQTFQTAFIGSLESCPIAANPDLVKRMTTKQRKGLKLALAITLSFVCFLVGLLFLAFGCRRKTRMWAVKQLSHKEEVNISGPFSFQTDSTTWVADVKLANSVPVVIFEKPLLNFTFVDLLSATSHFDRGTLLAEGRFGPVYRGFLPGGIHIAVKVLVHGSTMTDQEAARELEYLGRIKHPNLVPLMGYCLAGDQRIAIYDYMENGNLQNLLHDLPLGIQTTEDWTTDTLQEDHTNGIQNVGSEGLLTTWRFRHKIALGMARALAFLHHGCSPPIIHRDVKASSIYFDLNLEPRLSDFGLAKIFGNGLEDEISRESLGYVPPEFFETDTGSPTPKSDVFGFGVVLFELVTGKKPVGDDYPEENESSLVSWVRGLVRKNQGSRAIDPKIRGTGPETQMEEALRIGYLCTADLPTKRPSMHQIVGLLKDIEPVAHQ* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00252 867 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Eupl10g00252 867 Pfam Leucine rich repeat 196 254 IPR001611 GO:0005515
Eupl10g00252 867 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Eupl10g00252 867 FunFam Calmodulin-binding receptor kinase CaMRLK 265 385 - -
Eupl10g00252 867 Pfam Protein tyrosine and serine/threonine kinase 564 856 IPR001245 GO:0004672|GO:0006468
Eupl10g00252 867 ProSiteProfiles Leucine-rich repeat profile. 100 121 IPR001611 GO:0005515
Eupl10g00252 867 PRINTS Leucine-rich repeat signature 101 114 - -
Eupl10g00252 867 PRINTS Leucine-rich repeat signature 366 379 - -
Eupl10g00252 867 ProSiteProfiles Leucine-rich repeat profile. 368 390 IPR001611 GO:0005515
Eupl10g00252 867 CDD STKc_IRAK 566 861 - -
Eupl10g00252 867 Gene3D Ribonuclease Inhibitor 189 286 IPR032675 -
Eupl10g00252 867 Pfam Leucine Rich repeat 388 409 IPR001611 GO:0005515
Eupl10g00252 867 SMART serkin_6 560 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00252 867 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 117 211 - -
Eupl10g00252 867 SUPERFAMILY Protein kinase-like (PK-like) 545 859 IPR011009 -
Eupl10g00252 867 SUPERFAMILY L domain-like 58 433 - -
Eupl10g00252 867 FunFam Putative LRR receptor-like serine/threonine-protein kinase 521 635 - -
Eupl10g00252 867 Gene3D Transferase(Phosphotransferase) domain 1 636 866 - -
Eupl10g00252 867 Gene3D Phosphorylase Kinase; domain 1 520 635 - -
Eupl10g00252 867 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 295 427 - -
Eupl10g00252 867 Gene3D Ribonuclease Inhibitor 41 188 IPR032675 -
Eupl10g00252 867 SMART LRR_typ_2 366 389 IPR003591 -
Eupl10g00252 867 SMART LRR_typ_2 242 265 IPR003591 -
Eupl10g00252 867 SMART LRR_typ_2 98 121 IPR003591 -
Eupl10g00252 867 SMART LRR_typ_2 123 146 IPR003591 -
Eupl10g00252 867 SMART LRR_typ_2 170 194 IPR003591 -
Eupl10g00252 867 Gene3D Ribonuclease Inhibitor 287 455 IPR032675 -
Eupl10g00252 867 ProSiteProfiles Protein kinase domain profile. 560 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00252 Eupl-Chr10 16176682 16180057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00252 78 861 Receptor kinase-like Gene Family AT5G07280 32.533 2.10e-109 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Eupl10g00252 PK_Tyr_Ser-Thr 6.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00252 - - nnu:104603301 1365.13