Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00243 ATGGCGGAAAACCAGAGCTTGAGAGCTCCGAAAGAAGAAGAGATAGAAAGAGAAGAAACAGAGGAAGATGAGAAAGAAGAAGAGAAGCCTCTCTCTAAGCTACAGAACTCTCTCCCTTCTATGACTGTACCCGATCGTTCTTCGGCCGAAGCTGTGTTCAGAGGCCAAAGTTCTCAATCAGAAACCCTAACGGTACCTTCGTCGATTCCATCATCAGAGAACCATCATGATTCCGATTGCCCCTCTTTCTCTCAGCTACTCGCTGGTGCCATGGCTTCTCCAGTGGCCAATTCGTCGGCGGTCTTATCAGTAGGATTGGATGTGAAGCCGACGATTCCAATGGGTACTCCTTCGGTGGCCCTCGAGCCCGCTGGATTCAAGGGGCAATTCGAGATGTCCCATCAAGAAGCCTTGGCAAGTGTAACAGCTCAAGCTCAGGCACAGATGCAGCTTCCAGCTGGGTATCCATCTTCCTCACTGGAGTTATCGCCTGTTTCTCATACCCAATCAATGTTATCAGCAATAAGTCCAACTCCGCTACAACAAAGATTGCCACCAGTACCTCAAGATGATAATGTCTGTACGCCAGAAGTCAACCAGCAGATTTCTTCTGACAGGAAAACTAATCCTGCTCATGTTATTGTGAAGACACCCTCCACTGATGGGTACAACTGGCGGAAGTATGGTCAGAAGCAGGTGAAGAGTACTGAGAGTTCTCGAAGCTATTACAGATGTACATACATCAATTGTCATGCTAAGAAGAAGGTTGAACGTTGTGATCACTCTGGTCATGTTATCGAGATTATTTATAAAGGTCGGCACAATCATGACCCACCTCGAAAGATTAGATGCACTAAAGCGAGTGGGTTTGTATCATCTGCTGGAACTGTATCATCTGTTGGATTAGATGGAGGGAGCGGAACCATAGATCGTCCAGTTAGAAAACTTAATGATTCAGATCTATCTTCAAATAGGAGAGAACCTAGACATGCTATACCTGAACAGCAACTACATAACTTAAGTGAGTGTGATTGGGATACTGGCATTAAGGTTGAGGAGGAGCATGGTGATGAACCAGATCCAAAACGAAGGATGAAGGACATCAGTGTGGCACATTCTGCCCCTCTATTTAAAACAGTTAAAGAGCCTAAAATTGTTGTGCAAGCGGCTTGTGATGTTGGAATCTCAGGTGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCTAACCCCAGGTCACAGGATTTTGTCGAACATGTAGTACCTAGAAGTGGACTATTTACCCATAGAAGGAGTTACTACAAATGCACATCTGCTGGGTGCCCCGTCCGTAAGCATGTCGAGAGGGCTATAGATGACACAACAGCCATCATAATAACGTATGAGGGGAAACACGATCATGACATGCCTGTACCCAAGAAGCGCCATGGTCCACCAAGTGCCGCTCTTCTTATTGCTGCTGCGGCTGCCATGAATAGTGCGCAATTAAAAAAATCTGAAGCTTTAGCAAATCGAAAACCTTCAACTCAATGGTCAATGGACTCGGATGGAGAATTGACAGGGGAGAAGGCATTAGAACTCGGAGGTGAGAAGGCGCTGGAATCAGCTCGAACTCTTCTGAGCATTGGGATCGAAATCAAGCCCTACTGA 1665 0.4631 MAENQSLRAPKEEEIEREETEEDEKEEEKPLSKLQNSLPSMTVPDRSSAEAVFRGQSSQSETLTVPSSIPSSENHHDSDCPSFSQLLAGAMASPVANSSAVLSVGLDVKPTIPMGTPSVALEPAGFKGQFEMSHQEALASVTAQAQAQMQLPAGYPSSSLELSPVSHTQSMLSAISPTPLQQRLPPVPQDDNVCTPEVNQQISSDRKTNPAHVIVKTPSTDGYNWRKYGQKQVKSTESSRSYYRCTYINCHAKKKVERCDHSGHVIEIIYKGRHNHDPPRKIRCTKASGFVSSAGTVSSVGLDGGSGTIDRPVRKLNDSDLSSNRREPRHAIPEQQLHNLSECDWDTGIKVEEEHGDEPDPKRRMKDISVAHSAPLFKTVKEPKIVVQAACDVGISGDGYRWRKYGQKMVKGNPNPRSQDFVEHVVPRSGLFTHRRSYYKCTSAGCPVRKHVERAIDDTTAIIITYEGKHDHDMPVPKKRHGPPSAALLIAAAAAMNSAQLKKSEALANRKPSTQWSMDSDGELTGEKALELGGEKALESARTLLSIGIEIKPY* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00243 554 MobiDBLite consensus disorder prediction 1 15 - -
Eupl10g00243 554 FunFam WRKY transcription factor 207 280 - -
Eupl10g00243 554 MobiDBLite consensus disorder prediction 313 333 - -
Eupl10g00243 554 MobiDBLite consensus disorder prediction 51 81 - -
Eupl10g00243 554 MobiDBLite consensus disorder prediction 1 81 - -
Eupl10g00243 554 ProSiteProfiles WRKY domain profile. 391 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 MobiDBLite consensus disorder prediction 302 337 - -
Eupl10g00243 554 Gene3D WRKY domain 381 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 Gene3D WRKY domain 210 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 Coils Coil 8 28 - -
Eupl10g00243 554 ProSiteProfiles WRKY domain profile. 220 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 SMART WRKY_cls 219 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 SMART WRKY_cls 396 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 Pfam WRKY DNA -binding domain 398 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 Pfam WRKY DNA -binding domain 434 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 Pfam WRKY DNA -binding domain 221 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 SUPERFAMILY WRKY DNA-binding domain 390 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 SUPERFAMILY WRKY DNA-binding domain 217 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl10g00243 554 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 130 502 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00243 Eupl-Chr10 16008880 16041886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00243 216 552 WRKY Transcription Factor Family AT4G30935 48.547 4.52e-91 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl10g00243 WRKY 1.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00243 - - nnu:104610745 685.641