Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00237 ATGCCCGCTATGAAGAAGAATTCTGAGCACATCAACACCGGGCCCATATTCAACAAATTGCTGAAGGAAATTGGAAGTCCTGTTGAGTTTCAACTTCCAGACTGGTTGAAGAAACGGAAGCCTATGCCTTACACATTTATAAGGCGCAATATGTATCTTACTAAAAAGATTAAAAGGCGTCTTGAGGATGATGGCATATTCTGTTCCTGCAGTTCGTCTATGGGTTCTAGTGTGTGTGGTAGAGATTGCCACTGTGGGATGCTACTGTCTAGCTGCTCATCAAGTTGTAGATGTGGGAGTTCTTGTCTCAACAAACCATTTCAGCAACGACCTGTGAAGAAGATGAAGTTAGTGAAGACAGAGAAATGTGGATCCGGGTTAATAACAGATGAAGATATCAAGCAAGGAGAGTTTGTAATAGAGTATGTGGGAGAAGTTATTGATGACAAAACGTGTGAGGAAAGGCTTTGGAAAATGAAACACCGTGGAGAAACCAATTTCTATTTGTGTGAAATTAATCGAGATATGGTGATTGATGCCACATACAAGGGAAACAAGTCAAGATATATAAATCATAGTTGTCGGCCTAACACCGAGATGCAGAAATGGAGAATTGATGGCGAAACCAGAATTGGCATATTTGCAACTCGTGACATAAAAAGGGGCGAGCATCTGACATATGATTATCAGTTTGTTCAATTTGGTGCAGATCAGGATTGCTACTGTGGTGCTTTAGGATGCAGGCAGAAGTTGGGGGCTAAACCTAGTAAGCCAAAGTTGTCTTCTTCAGATGCTGCATTGAAACTGGTTGCATGCGAGGTGGCGGCATCTTCTCCTAAAGTAAAAGCAATTCTCTCTGGAAGACATGCTTACTCAAATGGAGGTCTGCACATAGGAAGCTCGCGTTGTGCCCCTAATGAAAGAGAAGCATGTTTCCGTAATTGTGTCGGAGAAGTTATTCGAATAATGCGTCCCTTTGATAAGAGGTATTTTGGGATTATAAAACGGTTCGACAACAATTCCAGAAAACACACAATAATGTACGAGGATGGGGGTGTTGAAATTCTTGACATGTCAAAAGAAGATTGGGAGTTTTGTACCTTGTGA 1107 0.4155 MPAMKKNSEHINTGPIFNKLLKEIGSPVEFQLPDWLKKRKPMPYTFIRRNMYLTKKIKRRLEDDGIFCSCSSSMGSSVCGRDCHCGMLLSSCSSSCRCGSSCLNKPFQQRPVKKMKLVKTEKCGSGLITDEDIKQGEFVIEYVGEVIDDKTCEERLWKMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCRPNTEMQKWRIDGETRIGIFATRDIKRGEHLTYDYQFVQFGADQDCYCGALGCRQKLGAKPSKPKLSSSDAALKLVACEVAASSPKVKAILSGRHAYSNGGLHIGSSRCAPNEREACFRNCVGEVIRIMRPFDKRYFGIIKRFDNNSRKHTIMYEDGGVEILDMSKEDWEFCTL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00237 368 ProSiteProfiles Post-SET domain profile. 236 252 IPR003616 -
Eupl10g00237 368 ProSiteProfiles AWS domain profile. 63 111 IPR006560 GO:0005634|GO:0042054
Eupl10g00237 368 SMART set_7 113 236 IPR001214 GO:0005515
Eupl10g00237 368 CDD SET_ASHR3-like 114 252 - -
Eupl10g00237 368 SUPERFAMILY SET domain 38 248 IPR046341 -
Eupl10g00237 368 Gene3D SET domain 31 268 IPR046341 -
Eupl10g00237 368 SMART shorttest3 63 112 IPR006560 GO:0005634|GO:0042054
Eupl10g00237 368 CDD Tudor_Agenet_AtEML-like 316 365 - -
Eupl10g00237 368 Pfam SET domain 124 229 IPR001214 GO:0005515
Eupl10g00237 368 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 283 IPR025787 -
Eupl10g00237 368 ProSiteProfiles SET domain profile. 113 230 IPR001214 GO:0005515
Eupl10g00237 368 PANTHER SET DOMAIN PROTEINS 36 323 - -
Eupl10g00237 368 FunFam Histone-lysine N-methyltransferase 30 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00237 Eupl-Chr10 15834221 15860455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00237 86 251 C2H2 Transcription Factor Family AT2G23740 32.796 4.78e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl10g00237 SET 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00237 - - nnu:104593380 622.083