Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00226 ATGGAGTTCATGAATCTCATTTGCCCTAATTCTCCAACTGTTTGGGATGGAAATGGCTTCTCGGAGTGTTTCGAGAACATGGTATTAGGTTTCGGAGCAAATTTGGTGACTGTAGTTATGATCGTTGTGTTTGGATTCACTAGAAGGAATGCCGGAGGAAATAGTAGGATTCCGCAGATGTCCCTTTTGGAGAAGGTTTTCTTGTATTTCTTACCTGCTTTCGGAGCATGCTTATCTTTGTACGATATGGTTTCACTTTCGAAGAAAGCCTTACAAGGACAAAATACCGTGTATCACGAGTGGTTTTTTAGATGTTCTCAGTTCTCGGTCTGGGCTACTATTATGCTCTTCTGGAAGTGTGACTATTGGTTCTTTATGTTTTGCAACCGAGTCCTTTGTTTCTGGTGGGTTGCAAAACCTCTGTTGGAGATCCCTCACTTATTGACAACGTTTCCTTCTTTAGAGGTTATGAGAGGTTTCAAAGAGACTTGTTCTGTCTTGGTGGATATCATATTTGGTGTATTTGTCAATATTCTCAGAGTAATGTGGGCATCTTCTAAAAGCAGGAAAGGTGGTACATTGGAAGATCCGCTTCTTTCACGTGGCACGGATTTGGAGGAAAGTCGTCTTAGAGATTTTAGTGGAAATGTTCATAGCTATTGGCATCTTCTTACTTTCAAGTCTGTCAGTTCAGTAATGGACCGTGGTGTGATGAAGCAGCTTGACTTCGATGATTTACTTCAAGTACCCATTGAGCTGAATCCATCCTTCTGCTACAGTACATTGCTAAGCTGTTGGGTAGCTGAACAAAGTAAAAATTGCGCTCACCCTTCATTGTTTAAAGCGATTTGTTATGCATACGGCTGGCCGTATTTCCGTCTTGGTTTATTGAAGGTATTAAATGATTGTATTGGTTTTGTGGGACCGCTGCTTCTCAATAGACTGATTTGGTTCCTTCAACAAGGTTCTGGATATTTGGAAGGCTATATTCTTGCTACCTCCTTGGGCCTTACTTCTATCCTTAAGTCCTTTTTGGATACGCAATACACTTTTCATCTTTCCAAACTAAAGTTAAAGCTACGGTCTAGTATTATGACAGTTATTTATCAAAAGTGCCTCTGTGTTAGCCTAGCAGAGCGCTCTAAATTTTCTGAAGGGGAAATTCAGACGTTCATGTCTATAGATGCTGATCGAACTGTCAATTTGTGCAACAGTTTCCATGATATGTGGAGTTTGCCTTTACAAATTGGAATCGCACTATTTCTTTTGTACACCCAAGTCAAATTTGCTTTTGTTTCCGGAATCACGATAACAGTCTTGTTAATACCAGTGAATAAATGGCTCTCTACTTTGATTGCAAGAGCGACAGAGAAAATGATGAAACAAAAGGATGAGAGAATCAGAAGGGCAGGAGAACTGTTGACGTATATTCGCACTTTGAAGATGTATGGTTGGGAGCTTCTATTTGCCAATCGCTTAAGGGAGACAAGATCCTTGGAAGTGAAGTACTTATCTACTCGAAAGTATTTGGATGCATGGTGTGTATTTTTTTGGGCGACAACGCCGTCACTTTTCTCTCTGTCCACATTTGGGCTCTTCACACTAACAGGGCATCCACTAAATGCGGCAACGGTGTTCACATGTCTTGCTCTGTTCAATACCTTGATCTCTCCATTAAATTCATTTCCATGGGTCATTAATGGGTTGATTGATGCCATCATATCTACTAGGCGGTTGAGCACATTCCTCTCCTGTTCTGAGCCTATTTCTGAATGGGTACATACAGCTGATTTGTCATCACCATCTCTCTCCAAAGGCCTGGATGATTCTACCCTTGAACATATGGCTGTTGTTGTCCGAAATGCATCTTGTGTTTGGTCAAACAGCAATGAGGAGGAACAAAGCTCAGTGTTGAATCACATAACTCTTGACATTCCTAAGGGATTCCTTGTTGCAGTAATCGGAGAGGTTGGTTCAGGCAAATCATCCTTGTTAAATTCAATTTTAGGAGAAATGCGGCTCATTCATGGTTCGGTACATTCTCGTGGTTCAGTAGCATATGTATCACAGGTGTCATGGATTCTGTCGGGCACAATACGTGATAATATCTTGTTTGGAAAGGATTATGACACTAAAAGATATGCAGAAGTACTGCAGGCATGTGCACTTGATGTTGATGTATCACTAATGGTTGGGAGAGACCTAGCTTATATTGGAGAGAAGGGAGTCAACTTATCAGGTGGACAGAAAGCACGTCTCGCATTGGCAAGGGCTGTGTATTGTGGTGCGGATATATTCATGCTCGATGATGTGCTCAGCGCAGTTGATGCACAAGTGGCCTGTTGGATTTTATACAATGCTATCCTGGGCCCTTTGATGAATCAGCGGACGCGCATTCTCTGTACTCATAATGTTCAGGCAATATCATCTGCTGATATGATTGTCGTCATGGATAAAGGACATGTGAAGTGGTCTGGAAGTTTAGCTGACTTCTTAGTTTCCCCATATTCAACAATCGCTTCACTGAAAGAATCAATGATATCTTCATCTCAACTTCTAAGACAAGAAAGCAGCAACAATGCTTCAGGTGATGCCAAACGCAATCTCCTACCAGAAAGAGACGTTATAAACATTTCTGAGGAATCACAAGAAGTCATTGATATAGAGTTGAGGAAAGAGGGTAGAGTTGAACTCAGCGTGTACAAAAATTATGCCAAATTTTCCAGCTGGCTCATTACAATAATAATATGTCTTTCAGCAATTTTAATGCAAGCATCTCGCAATGGAAATGATTTGTGGCTGTCTCACTGGGTTGATAGCACTACGGGAGGCCATAAAATGAAGTATTCCACGTCATTTTATCTGGTTATACTTAGCGTCTTCTGTATCATAAATTCCCTTTTAACCTTGGTAAGGGCATTCTCATTTGCGTTTGGTGGTTTACGTGCTGCAGTTCAAGTACACAACAAGCTTCTTAATAAGCTTATCAATGCACGTGTACATTTCTTTGATCAGACACCAACTGGAAGAATACTTAACAGGTTGTCTTCAGATCTTTACACCATTGATGATTCTCTTCCATTCATTCTCAACATTCTCTTAGCTAATTTCATTGGACTCTTGGGGATTGCAATAGTTTTGTCATATGTGCAGGTCATTCTCTTGCTTCTGCTGTTGCCCTTTTGGTATGTTTACAGCAAGTTACAGTTCTATTATAGGTCAACATCCCGTGAGCTACGAAGGCTAGACAGTGTTTCTCGTTCTCCTATCTATGCATCTTTCACAGAGACATTGGATGGATCATCAACTATAAGGGCATTCAAGGCCAAGGAATATTTCTTGGCTAGATTCATTGAGCATGTTGCATTATATCAGAAAACCTCCTACTCAGAGTTAACAGCAAGTTTATGGCTTTCTCTGCGCCTTCAATTGCTAGCAGCATGTGTAATCTCTTCTGTTGCTGTGTTGGCTGTCATTGGATGTCATGGTGGTTTCCCAGTTAGCTTTGGCACACCTGGACTAGTAGGCCTGGCTCTCTCATATGCAGCACCAATTGTGTCTTTGTTGAGCAGTTTTTTGACAAGTTTCACTGAAACTGAGAAGGAAATGGTTTCTGTTGAGCGGGTGCTTCAGTATATGGATGTTCCTCAAGAAGAACTTCTGGGACGCCAATCTTTACATCCCGATTGGCCCTTTCAAGGACATATTGAATTTCAGCATGTTACCTTGCGATATATGCCATCTTTGCCAGCTGCTCTGCATGATATTACTTTTACTATTGCAGGAGGCATGCAGGTTGGAATTGTTGGAAGAACAGGTGCTGGGAAATCTAGTATCCTAAATGCCCTTTTTCGCCTTAGTCCAATATCTGGGGGGTGTATTTTAGTGGATGGCATAAATGTGGCCGACGTTTCCGTTAGAGATCTCCGCTCACATTTTGCAGTTGTTCCACAGAGCCCATTTTTATTTGAAGGACCATTAAGGGACAACCTAGATCCGACTCGGGTGACAAGTGACTCAAAAATTTGGGAGGCTCTTAAGAAATGCCAAGTTAAGGATGAAGTAGAAGCAGCAGGAGGGCTGGACACTCATGTAAAAGAAGCTGGGATATCATTTTCTGTTGGGCAACGTCAGCTTCTGTGCCTTGCACGTGCTCTTCTCAAGTCTTCAAAGGTACTCTGTTTGGATGAATGCACTGCCAATGTTGACACTCGAACGTCATCAATACTACAGAATGCCATTTCCAGTGAATGCAAAGGCATGACAGTGATCACAATTGCTCACCGCATTTCCACTGTACTGAACATGGACAATATTCTGATTCTTGACCAAGGGATACTGGTTGAACAGGGAAATCCACAGGTTCTTTTACAAGATGAATTCTCCAGATTTTCGAGTTTCGCCAAAGCTTCGACAATGTGA 4422 0.4161 MEFMNLICPNSPTVWDGNGFSECFENMVLGFGANLVTVVMIVVFGFTRRNAGGNSRIPQMSLLEKVFLYFLPAFGACLSLYDMVSLSKKALQGQNTVYHEWFFRCSQFSVWATIMLFWKCDYWFFMFCNRVLCFWWVAKPLLEIPHLLTTFPSLEVMRGFKETCSVLVDIIFGVFVNILRVMWASSKSRKGGTLEDPLLSRGTDLEESRLRDFSGNVHSYWHLLTFKSVSSVMDRGVMKQLDFDDLLQVPIELNPSFCYSTLLSCWVAEQSKNCAHPSLFKAICYAYGWPYFRLGLLKVLNDCIGFVGPLLLNRLIWFLQQGSGYLEGYILATSLGLTSILKSFLDTQYTFHLSKLKLKLRSSIMTVIYQKCLCVSLAERSKFSEGEIQTFMSIDADRTVNLCNSFHDMWSLPLQIGIALFLLYTQVKFAFVSGITITVLLIPVNKWLSTLIARATEKMMKQKDERIRRAGELLTYIRTLKMYGWELLFANRLRETRSLEVKYLSTRKYLDAWCVFFWATTPSLFSLSTFGLFTLTGHPLNAATVFTCLALFNTLISPLNSFPWVINGLIDAIISTRRLSTFLSCSEPISEWVHTADLSSPSLSKGLDDSTLEHMAVVVRNASCVWSNSNEEEQSSVLNHITLDIPKGFLVAVIGEVGSGKSSLLNSILGEMRLIHGSVHSRGSVAYVSQVSWILSGTIRDNILFGKDYDTKRYAEVLQACALDVDVSLMVGRDLAYIGEKGVNLSGGQKARLALARAVYCGADIFMLDDVLSAVDAQVACWILYNAILGPLMNQRTRILCTHNVQAISSADMIVVMDKGHVKWSGSLADFLVSPYSTIASLKESMISSSQLLRQESSNNASGDAKRNLLPERDVINISEESQEVIDIELRKEGRVELSVYKNYAKFSSWLITIIICLSAILMQASRNGNDLWLSHWVDSTTGGHKMKYSTSFYLVILSVFCIINSLLTLVRAFSFAFGGLRAAVQVHNKLLNKLINARVHFFDQTPTGRILNRLSSDLYTIDDSLPFILNILLANFIGLLGIAIVLSYVQVILLLLLLPFWYVYSKLQFYYRSTSRELRRLDSVSRSPIYASFTETLDGSSTIRAFKAKEYFLARFIEHVALYQKTSYSELTASLWLSLRLQLLAACVISSVAVLAVIGCHGGFPVSFGTPGLVGLALSYAAPIVSLLSSFLTSFTETEKEMVSVERVLQYMDVPQEELLGRQSLHPDWPFQGHIEFQHVTLRYMPSLPAALHDITFTIAGGMQVGIVGRTGAGKSSILNALFRLSPISGGCILVDGINVADVSVRDLRSHFAVVPQSPFLFEGPLRDNLDPTRVTSDSKIWEALKKCQVKDEVEAAGGLDTHVKEAGISFSVGQRQLLCLARALLKSSKVLCLDECTANVDTRTSSILQNAISSECKGMTVITIAHRISTVLNMDNILILDQGILVEQGNPQVLLQDEFSRFSSFAKASTM* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00226 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 296 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl10g00226 1473 SUPERFAMILY ABC transporter transmembrane region 909 1218 IPR036640 GO:0005524|GO:0016020
Eupl10g00226 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1459 IPR027417 -
Eupl10g00226 1473 FunFam ATP-binding cassette subfamily C member 10 270 588 - -
Eupl10g00226 1473 Gene3D - 601 865 IPR027417 -
Eupl10g00226 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 914 1201 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl10g00226 1473 FunFam ABC transporter C family member 13 599 853 - -
Eupl10g00226 1473 SMART AAA_5 647 821 IPR003593 GO:0016887
Eupl10g00226 1473 SMART AAA_5 1262 1452 IPR003593 GO:0016887
Eupl10g00226 1473 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524|GO:0016887
Eupl10g00226 1473 CDD ABC_6TM_MRP7_D1_like 294 579 - -
Eupl10g00226 1473 CDD ABC_6TM_MRP7_D2_like 913 1213 - -
Eupl10g00226 1473 CDD ABCC_MRP_domain2 1234 1453 - -
Eupl10g00226 1473 FunFam ABC transporter C family member 5 877 1219 - -
Eupl10g00226 1473 CDD ABCC_MRP_domain1 617 820 - -
Eupl10g00226 1473 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 219 1469 - -
Eupl10g00226 1473 Pfam ABC transporter 1253 1400 IPR003439 GO:0005524
Eupl10g00226 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 832 IPR027417 -
Eupl10g00226 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 844 IPR003439 GO:0005524
Eupl10g00226 1473 SUPERFAMILY ABC transporter transmembrane region 281 579 IPR036640 GO:0005524|GO:0016020
Eupl10g00226 1473 FunFam ATP-binding cassette (ABC) transporter, putative 1222 1470 - -
Eupl10g00226 1473 Gene3D ABC transporter type 1, transmembrane domain 878 1219 IPR036640 GO:0005524|GO:0016020
Eupl10g00226 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1469 IPR003439 GO:0005524
Eupl10g00226 1473 ProSitePatterns ABC transporters family signature. 1372 1386 IPR017871 GO:0005524|GO:0016887
Eupl10g00226 1473 Pfam ABC transporter 638 770 IPR003439 GO:0005524
Eupl10g00226 1473 Gene3D ABC transporter type 1, transmembrane domain 281 586 IPR036640 GO:0005524|GO:0016020
Eupl10g00226 1473 Pfam ABC transporter transmembrane region 295 559 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl10g00226 1473 Pfam ABC transporter transmembrane region 914 1163 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl10g00226 1473 Gene3D - 1222 1468 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00226 Eupl-Chr10 15403763 15560973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00226 637 832 Calmodulin-binding Proteins AT2G36910 31.132 1.85e-17 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00226 K05674 - msin:131217009 2200.25