Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00214 ATGGAATTCAGATTCCGAGCAGACGAAGATAAGACATCTCCGTATTTCTCTCCTTCGTCGAGCGATAGCTATTTCACCAAACAAGCGTTGCGTGCGGGTTATTTAAGTAAGGGCCCTTTAAGTAATGACATCCGAAGAACCGATTTTGTGAGGAATTCGGATCCTGTAAGAGAAGCGATTCAACGGGAGCTTGAGAAAGAGCGGATCAGAGAAGAGATTATCGCTGCGGAGATAGCCCGTAAGCAGGCACTCGAGGCGGAAGTGAGGAGGGAACTCGCAATGGAGAGAGATTTAGCACTCGGAAGAGCAGAGAGGTTTTCATTGGTGGCAACAGCTCCATCACCGTCGCTGTGGTCTGAACCGAGGCTACCATTGATACATCATGCGGATAGTACTAGGTTAGAAGATAGATTGTCTTTTCCGTTGGCTCGTCCAGAAGTAGGGGTCTTTGAAAGGTTGCCGTTTCAGCGCCGTCCAGAATCGGCTAGGGTTCCTGAGGTTAAGGCGCTTCCGGAGGTGAGCAAGGGACAAGTTGGACAACTTATGTTCTTGGCTAAGCCCATGAGCCATAATCTTTCTGGGACAAAGAGAAAAGCAGGAGCAGGAGCTGGGGAGCTTGCATTAGTTAGTTCGAAGAAGAAAACCCCCAAGGAGTGGAGTTGTGCTCTCTGTCAAGTGAGTGCCACAAGTGAGCAAGGTCTGAATGACCACCTCCAAGGGAAGAAGCACAAAGCCAAGGAGGCTGAGCTGAGAGAGAATAGAACAGCTAGCAGGAACACCGGTAGCTCCACTCCATTGCCAAAGAAAACTGATAAACCCAAGCTCACAAAGACAAGTGGCAATCCAAAGATTCCAAACCCAAACCACGGGAAAAAACAGGAGGGGAAATTGTTGCAGGATAAGAAACAGCATGTCAGGAAGAATGGGGAGGCATCATTGCTGAAAAAGCAAAAGATCGGAGATTTGAAGAAGAAAAAATTTAAGCTTTGGTGCGAACATTGTCATGTGGGGTGCAACAGTGAAACTGTAATGGCCGCTCACAGAAGTGGGAAGAAGCACATGGCCCAGGTGCAGGGACTGAAGCAAAATTGTGGGGATGTTCCAGCCATCATTACCACCATTACAACTGAGACTATTCATGGAAAAGCAGAAGATGCAACTGAAGAGGAGAACGAAGAATCAATGGAAAATGTTGATGGGCTAGTATATGGAGTGGAAGATGCTGAGGAGCCAGCCAAGGCAATGGAGGCAGCAGTAGACGAGGAGGCCGAGGCAGAAGGTTCAGGGGAAATGGAAGTGATGGATAGGCTGACGGCAACGGAAACATCTGACATGGATTGA 1341 0.4832 MEFRFRADEDKTSPYFSPSSSDSYFTKQALRAGYLSKGPLSNDIRRTDFVRNSDPVREAIQRELEKERIREEIIAAEIARKQALEAEVRRELAMERDLALGRAERFSLVATAPSPSLWSEPRLPLIHHADSTRLEDRLSFPLARPEVGVFERLPFQRRPESARVPEVKALPEVSKGQVGQLMFLAKPMSHNLSGTKRKAGAGAGELALVSSKKKTPKEWSCALCQVSATSEQGLNDHLQGKKHKAKEAELRENRTASRNTGSSTPLPKKTDKPKLTKTSGNPKIPNPNHGKKQEGKLLQDKKQHVRKNGEASLLKKQKIGDLKKKKFKLWCEHCHVGCNSETVMAAHRSGKKHMAQVQGLKQNCGDVPAIITTITTETIHGKAEDATEEENEESMENVDGLVYGVEDAEEPAKAMEAAVDEEAEAEGSGEMEVMDRLTATETSDMD* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00214 446 PANTHER OS06G0651300 PROTEIN-RELATED 1 398 - -
Eupl10g00214 446 MobiDBLite consensus disorder prediction 289 312 - -
Eupl10g00214 446 MobiDBLite consensus disorder prediction 1 22 - -
Eupl10g00214 446 SUPERFAMILY beta-beta-alpha zinc fingers 322 360 IPR036236 -
Eupl10g00214 446 MobiDBLite consensus disorder prediction 236 254 - -
Eupl10g00214 446 SUPERFAMILY beta-beta-alpha zinc fingers 211 250 IPR036236 -
Eupl10g00214 446 Gene3D Classic Zinc Finger 207 256 - -
Eupl10g00214 446 MobiDBLite consensus disorder prediction 235 312 - -
Eupl10g00214 446 Pfam Zinc-finger of C2H2 type 330 353 - -
Eupl10g00214 446 Pfam Zinc-finger of C2H2 type 219 243 - -
Eupl10g00214 446 Coils Coil 66 86 - -
Eupl10g00214 446 Gene3D Classic Zinc Finger 310 359 - -
Eupl10g00214 446 SMART ZnF_U1_5 326 360 IPR003604 GO:0003676|GO:0008270
Eupl10g00214 446 SMART ZnF_U1_5 216 250 IPR003604 GO:0003676|GO:0008270
Eupl10g00214 446 MobiDBLite consensus disorder prediction 255 269 - -
Eupl10g00214 446 MobiDBLite consensus disorder prediction 410 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00214 Eupl-Chr10 15128127 15149988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00214 207 357 C2H2 Transcription Factor Family AT5G61190 25.641 6.13e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00214 - - nnu:104603254 315.849