Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00179 ATGCAGGCAGATCAGACGGTTTTGAGCTTAAGGCCTGGTGGTGGAGGCATCAGAGGAAGCAGACTCCTTGGCCCTCGCTTCGAATCTGCTTTCGGCAGTTCAGTCGGTGCTGGTGGTTCTTCGATCTCTTCCTCGTCCTCCGATCGCTTTCATGGCGGTTCCCTTCTCTCTTCATCTCTCAAGATTGGAGACTCCTGGTTGGAGGGTCACGAGCGTGTTCGGTACACCCGAGACCAACTTTTACAACTTAGGGAGGTTGTTAATGTCCCCGATGATATTCTGAAAATCAAACAAGAAATTGAGGCTGAATTCTTTGGTGAAGATCAGAACTGGGGCCGTGGAGATGGCAATGTACAACCTCAACCCCAAACTCGTTATTCTGAGCCAGATAATCGTGATTGGCGTGGCCGGTCTGCACAGTTGCCTGCCTCTGGAGAGGATAGGTCTTGGGAAACAATTCGAGATAATAAAGAGTCTAGACAGCAGGAAGCTAATCAATTTAATCGCCAAGACCAACTAAATTCACAGTTTTCAAGGGGAGGACCTGCTCCTGCTCTCATCAAGGCTGAGGTACCATGGTCAGCTCGAAAGGGGAATCTCTCTGAGAAAGAACGTGTGTTGAAGACAGTGAAAGGTATATTGAACAAGCTGACTCCAGAGAAGTTCGATCTTCTCAAGGGCCAACTGATTGACTCCGGGATCACAACACCAGACATATTAAAGGGTGTTATCTCACTGATATTTGATAAAGCTGTACTGGAGCCCACATTTTGCCCCATGTATGCTCTTCTCTGTTTTGATCTCAGTGAAAAGCTCCCACCATTCCCCTCTGATGAACCTGGTGGGAAAGAAATCACGTTCAAGCGAATCTTGTTGAATAACTGTCAAGAGGCATTTGAAGGTGCTGACAATATGAGGGCTGAAATCAGGCAGATGACTGCCCCTGAGCAAGAATTGGAACGTAGGGATAAAGAAAGAATGGTGAAGCTGCGTACACTTGGAAACATCCGCCTCATTGGGGAACTTCTAAAGCAGAAGATGGTGCCTGAGAAGATTGTTCACCACATTGTTCAGGAACTGTTAGGACATGATGGTAAAACTGCCCCAGATGAAGAGAATGTAGAAGCCATATGTCAGTTCTTCATTACCATTGGTAAGCAGCTTGATGAGAGCCCCAAATCTCGACGTTTCAATGATGCCTACTTCAACCGACTGAAGGAGCTGACAACACACCCCCAGTTGGCACCACGGATGAGGTTCATGGTCCGTGATGTTCTGGATCTGCGGGCCAACAACTGGGTCCCCAGGCGTGAAGAGGTGAAAGCCAAGACCATTACTGAAATCCATTCGGAGGCAGAGAAGAATCTTGGGTTGCGTCCAGGTGCAACTGCAAACATGAGAAATGGTCGTGGTGTTGCAGGTGCTCAAGGAAGTATTGGCCCTGGAGGCTTCCCCATCAACCGACCTGGTTCTGGGGGTATGATGCCTGGAATGCCTGGAACTAGAAAGATGCCTGGGATGCCAGGGATGCCAGGGATTGATAATGACAATTGGGAGGTCCCTCGTAATCGGTCAATGCCAAAGGGCGAGGCTTTGGCCATGCAGTCTGTCGGACGCGTTCAACCTCCCTTGGTTAGCAAATCACCATCCCTTAACTCAAAGCTGTTACCTCAGGGTAGTGGTGGTCTGATAACTGGTAAAACAAGTGCATTGTTGCAGGGCAGTGGTGCCCCTTCAGGCCGTCCTTCCAGCTTAGTTTCGGGTATGGAACCTGTAGTCCAAAGCCCTGGACCCACAAAACCTGTTGCTCCGGTAGCATCCATTCTTCCACTTCCTGAGAAGCGGTCAGCTCCTGTGATAAGATCGAACCCAGCTGATCTTCATAAGAAAACAGTTTCTCTTCTGGAGGAGTACTTCAGCGTTCGCATTCTCGATGAAGCGTTACAGTGCGTGGAGGAGCTGAAAGCCCCTGAATACCACTCTGAGGTTGTCAAGGAAGCTATCTCCCTTGCACTGGAGAAGAGTCCACCATGTGTGGAACCAGTTGCGAAGTTCCTTGAGTTCTTGTTCAATAAGAAGGTTTTGACTGCTAGGGATATAGGGACCGGATGTCTGCTCTACGGGTCTATGTTGGATGACATCGGCATTGACATTCCAAAAGCACCAAGTAATTTTGGTGAGGTTATTGGGAAGCTGGTCCTGGCTGGTGGTCTGGACTTCAAGGTGGTGAAGGAGGTTCTGAAGGTGGTGGAGGATCCCAGGTTCCGGAGAGTTATCTTTGATGCTGCAACGAGAAGTGTCAGTACAAGCCCTGCTGCTCAGAGTGTGTTGGGCGTGCAGGGAGCCGATATCCAGGCCTGTGAGAGCCTGCTCTCTTAA 2379 0.4939 MQADQTVLSLRPGGGGIRGSRLLGPRFESAFGSSVGAGGSSISSSSSDRFHGGSLLSSSLKIGDSWLEGHERVRYTRDQLLQLREVVNVPDDILKIKQEIEAEFFGEDQNWGRGDGNVQPQPQTRYSEPDNRDWRGRSAQLPASGEDRSWETIRDNKESRQQEANQFNRQDQLNSQFSRGGPAPALIKAEVPWSARKGNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTPDILKGVISLIFDKAVLEPTFCPMYALLCFDLSEKLPPFPSDEPGGKEITFKRILLNNCQEAFEGADNMRAEIRQMTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDGKTAPDEENVEAICQFFITIGKQLDESPKSRRFNDAYFNRLKELTTHPQLAPRMRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATANMRNGRGVAGAQGSIGPGGFPINRPGSGGMMPGMPGTRKMPGMPGMPGIDNDNWEVPRNRSMPKGEALAMQSVGRVQPPLVSKSPSLNSKLLPQGSGGLITGKTSALLQGSGAPSGRPSSLVSGMEPVVQSPGPTKPVAPVASILPLPEKRSAPVIRSNPADLHKKTVSLLEEYFSVRILDEALQCVEELKAPEYHSEVVKEAISLALEKSPPCVEPVAKFLEFLFNKKVLTARDIGTGCLLYGSMLDDIGIDIPKAPSNFGEVIGKLVLAGGLDFKVVKEVLKVVEDPRFRRVIFDAATRSVSTSPAAQSVLGVQGADIQACESLLS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00179 792 MobiDBLite consensus disorder prediction 107 181 - -
Eupl10g00179 792 FunFam Eukaryotic translation initiation factor isoform 4G-2 198 433 - -
Eupl10g00179 792 Gene3D - 622 779 - -
Eupl10g00179 792 MobiDBLite consensus disorder prediction 165 179 - -
Eupl10g00179 792 ProSiteProfiles MI domain profile. 626 748 IPR003891 -
Eupl10g00179 792 MobiDBLite consensus disorder prediction 572 599 - -
Eupl10g00179 792 SUPERFAMILY ARM repeat 624 771 IPR016024 -
Eupl10g00179 792 MobiDBLite consensus disorder prediction 148 164 - -
Eupl10g00179 792 Pfam MIF4G domain 207 432 IPR003890 GO:0003723|GO:0005515
Eupl10g00179 792 SMART ma3_7 627 739 IPR003891 -
Eupl10g00179 792 SUPERFAMILY ARM repeat 199 435 IPR016024 -
Eupl10g00179 792 Pfam MA3 domain 628 739 IPR003891 -
Eupl10g00179 792 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 63 791 IPR045208 GO:0003743
Eupl10g00179 792 Gene3D - 198 433 - -
Eupl10g00179 792 SMART if4_15 207 432 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00179 Eupl-Chr10 13948876 13960354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00179 2 790 Eukaryotic Initiation Factors Gene Family AT5G57870 61.768 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00179 K03260 - ming:122076533 1140.56