Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00178 ATGAGCATGGTGAACGAGTACATCGTCTTCTTTGCTAAATTGCTTCTGATGCAGTCATTCATGACTGGTTTGGCTATATCTTCGACCAACTTGACCGATCAGTCTGCTCTTCTTGCCTTCAGAGATCATGTGTTTGATCCAAACAACACACTGACTAATAACTGGACCATCACAACCTCATTTTGCAATTGGATTGGAGTCTCTTGCAGCCTCCGAAGGCAAAGAGTCACCACCTTGAATCTTTCCTACATGAATCTTCAAGGCACCATCAACCCAATTATCTACAACCTCTCCTTCCTTGTCTCCCTCGACCTCCGCAACAACAGCTTCCATGGCTATCTACCAAATGAAGTTGGCAATTTACGTCGCTTGAGAAATATCGATTTCGGAAACAACAATTTTAATGGTACTATTCCTTCTTCCCTCGGTAACATATCGACGCTCGAGGTGTTGAATTTGGAAAACAACAAATTCCAAGGAACTATACCAATGGAGATGAGTAATCTTCTCAATTTGCAGATGTTGATCATTAGAAACAATGAACTAATGGGTTCAATTCCTTCCACCATCTTCAACATCTCATCTTTGCGGATTATGGAATTCTCGGATAATCGCTTCTCCGGTAACTTACCAACAGGTATGGGATATCATCTTCCTAAACTTGAGGGGCTTTATCTTTCTAACAATCAACTCGGTGGGCAGATTCCGTCGAGTTTATCGATATGCGGAGAACTTCGAACCATATCTGTGGCGGATAATGAATTCAATGGAAGGATACCGAGTGAAATTGGGAACTTAACTAGGCTTCAGATTCTGCGACTTACTGGTAACCACATCACAGGTATGATCCCAAATTCCTTGGGAAATATTTCGAGTTTGGAAATCATTACCATGGGACGAAACAACATCTCCGGTGACATTCCTGAAGAGTTGGGAAAGCTCAAAAATTTGCGCTTGCTAAATATTGAGCTAAGCAATCTTACTGGTGCAATACCTCATTCAATTTTCAACATCTCCTCCTTACAGGCCATTTCACTTGCATTTAATCGACTTGAAGGGGAAATTCCAGCAAATATGGGCAATTGGCTTCCTAATCTTGAAGTACTTTTTCTCTCGAACAATCGACTTAGTGGAAAAATCCCAGTTTCTATTTCAAATTCTTCCCTTCTCACCATGCTAGACTTTGGTAGTAACTTATTCACTGGATCAATACCGACGTCTCTTGGTAATTTGCAACTCTTACAGTCCCTTCTTCTAGTCGGTAATCAGTTAACCAACGAACCGGCCAACGCTGAGTTTCATTTCCTTACTTCATTGACGGAATGCAGACATCTGAAATACTTGGTAATAGCATTCAATCCACTGAATGGCTTCCTTCCAAATTCTATTGGGAATCTCTCGACTTCTCTTCAAGTATTCGTTGCATCTGGATGCCAGATCAAGGGAAGCATACCTATAGAAATCGGTAACTTAAGTGGCTTAACATGGTTTGGATTAGCTGTCAATAACTTGAGTGGAGCTATTCCATCAACAATCGGTGAATTACAGATGCTTCAAAGGTTCTCTCTTGATCGTAATGAGTTACAAGGATCGATTCCGAGCGAGCTATGCTCATTGACTCAGCTGGGTGAGCTAGCTTTTCATGAAAACAAGCTCATGGGCTCAATACCAAACTGCATAGGCAACCTTCGTCGGCTACAAAAACTTTTCCTACATTCCAATGAATTGTCATCACCAATACCTTTGGGTTTGTTGAGTCTCCAAAATCTCTTAATTTTGAACTTGTCTCATAATTCCCTAAGTGGACCTCTCCCTGTAGAAATGGAGAAGTTGAGCGTTATGGAAGAAATGGATCTGTCGCGGAATCAATTATCAGGTAACATTCCAAGCAGCATAGGCGAGATCGAAAGTTTAAGATTTCTTAGCTTGTCATGGAACTCATTCGATGGTCCTATACCCATATCATTTGGTAAATTGATAAGCTTGGAATCCATGGACCTCTCTTATAATAACCTTTCTGGTTCGATTCCAAATTCGATGGAGGAACTTTTACATCTTGTACATCTTAATCTGTCTTTCAATAGGCTCCAAGGAGAAATTCCCAAGAGAGGAGCTTTTGTGAACCTCACAATCCAATCTGTCATGGGGAATGAAGCACTATGTGGATCATCAGAACTACAACTACCAGCTTGCCCCAAGAACAGCGCTACAAAATCAAGGCCTAAAGCACTTCGAGTCATGTATATTTTCCTGATCATCATCGTTCCCATAGTGGTTATATTTACTATTTTGACTCTATGGTTAAGATATCGAGTAAGGAAGAGGCGGGTTCTAGTCCCTGCTGATCAATTATCACCCATGACGACACATAGAATGATTTCATACCAAGAACTTCTTCAAGCAACAGATAACTTTAGTGAAGCCAACTTACTTGGATTTGGGGGTTTCAGTTCAGTGTACAAAGGGATATTGTCAAATGGGACGACAACTGCAGTGAAGGTTTTGAATTTGCAACTCGAGGGAGCATTCAAGAGTTTTGATGCAGAATGTGAAGTGTTACGCAACGTTCGGCATAGAAATCTTGTTACAGTTATCAGTTCTTGCTCCAATCTCCAATTTAGAGCACTAGTTCTTCAGTATATGCCTAATGGAAGCCTGGAAAAGTCCTTGTATTCCCACAACTACTGTTTAAGTCTCCTTCAAAGAATAAATATTTCCATGGATGTCGCATTCGCTTTAGAGTATCTCCATCATGGTTATTCGGAACCAGTGGTACACTGCGATTTGAAGCCGAGCAATGTCCTCTTAGATGAAGATATGATTGCGCACGTAGCCGACTTTGGCATTGCGAAGATCCTAGCTGAGAATCAGTCTACAACACAAACCAAGACCTTGGGGACAATTGGGTACATTGCACCAGAGTACGGATCAGAAGGAAGAGTGTCAACAAGCAGCGATGTTTATAGCTACGGGATCATGTTGCTGGAAATATTTACAAGAAAGAAGCCAAGTGACGAGATGTTTGTTGGAGATATGAGCTTGAGGAAATGGGTAAATGCAGTGTTTCCTAATGCAGTAAATGAGGTTGTGGATGCCAATCTCTTGAGAGGAGATGACCTAACAACCCAAACACAGCAACGTTGCCTCTCATCCATCATGGGATTAGCTTTGGAGTGTTCAATGGAGTCGCCTGAAGAGAGGATTAACATGAAAGACGTTGTGGTTAGGCTCAGCAAGATCAAATCGGAGTTTGTTTCCACAGCAGGAAGTGCTTCAGGTAAGAACCCATGA 3291 0.4151 MSMVNEYIVFFAKLLLMQSFMTGLAISSTNLTDQSALLAFRDHVFDPNNTLTNNWTITTSFCNWIGVSCSLRRQRVTTLNLSYMNLQGTINPIIYNLSFLVSLDLRNNSFHGYLPNEVGNLRRLRNIDFGNNNFNGTIPSSLGNISTLEVLNLENNKFQGTIPMEMSNLLNLQMLIIRNNELMGSIPSTIFNISSLRIMEFSDNRFSGNLPTGMGYHLPKLEGLYLSNNQLGGQIPSSLSICGELRTISVADNEFNGRIPSEIGNLTRLQILRLTGNHITGMIPNSLGNISSLEIITMGRNNISGDIPEELGKLKNLRLLNIELSNLTGAIPHSIFNISSLQAISLAFNRLEGEIPANMGNWLPNLEVLFLSNNRLSGKIPVSISNSSLLTMLDFGSNLFTGSIPTSLGNLQLLQSLLLVGNQLTNEPANAEFHFLTSLTECRHLKYLVIAFNPLNGFLPNSIGNLSTSLQVFVASGCQIKGSIPIEIGNLSGLTWFGLAVNNLSGAIPSTIGELQMLQRFSLDRNELQGSIPSELCSLTQLGELAFHENKLMGSIPNCIGNLRRLQKLFLHSNELSSPIPLGLLSLQNLLILNLSHNSLSGPLPVEMEKLSVMEEMDLSRNQLSGNIPSSIGEIESLRFLSLSWNSFDGPIPISFGKLISLESMDLSYNNLSGSIPNSMEELLHLVHLNLSFNRLQGEIPKRGAFVNLTIQSVMGNEALCGSSELQLPACPKNSATKSRPKALRVMYIFLIIIVPIVVIFTILTLWLRYRVRKRRVLVPADQLSPMTTHRMISYQELLQATDNFSEANLLGFGGFSSVYKGILSNGTTTAVKVLNLQLEGAFKSFDAECEVLRNVRHRNLVTVISSCSNLQFRALVLQYMPNGSLEKSLYSHNYCLSLLQRINISMDVAFALEYLHHGYSEPVVHCDLKPSNVLLDEDMIAHVADFGIAKILAENQSTTQTKTLGTIGYIAPEYGSEGRVSTSSDVYSYGIMLLEIFTRKKPSDEMFVGDMSLRKWVNAVFPNAVNEVVDANLLRGDDLTTQTQQRCLSSIMGLALECSMESPEERINMKDVVVRLSKIKSEFVSTAGSASGKNP* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00178 1096 Gene3D Ribonuclease Inhibitor 181 284 IPR032675 -
Eupl10g00178 1096 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 881 1090 - -
Eupl10g00178 1096 Gene3D Ribonuclease Inhibitor 362 431 IPR032675 -
Eupl10g00178 1096 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Eupl10g00178 1096 FunFam Serine-threonine protein kinase plant-type 785 880 - -
Eupl10g00178 1096 ProSitePatterns Protein kinases ATP-binding region signature. 811 833 IPR017441 GO:0005524
Eupl10g00178 1096 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Eupl10g00178 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672|GO:0006468
Eupl10g00178 1096 Gene3D Phosphorylase Kinase; domain 1 787 880 - -
Eupl10g00178 1096 FunFam Inactive leucine-rich repeat receptor-like protein kinase 440 731 - -
Eupl10g00178 1096 Pfam Leucine rich repeat 637 696 IPR001611 GO:0005515
Eupl10g00178 1096 Gene3D Ribonuclease Inhibitor 432 740 IPR032675 -
Eupl10g00178 1096 SMART LRR_typ_2 218 242 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 683 708 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 515 539 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 411 434 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 363 387 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 169 193 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 611 635 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 266 289 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 659 682 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 97 121 IPR003591 -
Eupl10g00178 1096 SMART LRR_typ_2 563 587 IPR003591 -
Eupl10g00178 1096 SUPERFAMILY L domain-like 468 724 - -
Eupl10g00178 1096 ProSiteProfiles Protein kinase domain profile. 805 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00178 1096 SUPERFAMILY RNI-like 79 427 - -
Eupl10g00178 1096 Gene3D Ribonuclease Inhibitor 285 361 IPR032675 -
Eupl10g00178 1096 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 191 - -
Eupl10g00178 1096 Gene3D Transferase(Phosphotransferase) domain 1 881 1091 - -
Eupl10g00178 1096 PANTHER OS04G0122200 PROTEIN 302 1084 - -
Eupl10g00178 1096 Pfam Protein tyrosine and serine/threonine kinase 809 1076 IPR001245 GO:0004672|GO:0006468
Eupl10g00178 1096 SUPERFAMILY Protein kinase-like (PK-like) 785 1077 IPR011009 -
Eupl10g00178 1096 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 217 439 - -
Eupl10g00178 1096 SMART serkin_6 805 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00178 1096 Pfam Leucine Rich Repeat 444 466 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00178 Eupl-Chr10 13899597 13914569 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00178 559 705 Receptor kinase-like Gene Family AT5G20480 33.333 6.80e-14 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl10g00178 PK_Tyr_Ser-Thr 5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00178 - - nnu:104599361 1134.01