Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00173 ATGGAAGCGAGTGCCGGGTTGGTTGCCGGATCACACAACCGGAATGAACTCGTCGTCATTCACGGTCACGAAGAGCCGAAGCCGTTGAAGGCATTGAATGGTCAGGTCTGTGAGATATGTGGCGATGAGATCGGTATCACAACGGAAGGCGATCTGTTTGTGGCATGCAATGAATGCGGGTTTCCGGTGTGCCGGCCTTGTTACGAGTATGAGAGGAGAGAAGGGAGCCAATTGTGTCCCCAGTGCAAGACCCGGTACAAACGTCTCAAAGGGAGTCCCAGGGTGGAGGGAGATGATGATGAAGAAGATATCGATGATATCGAGCACGAATTCAATATCGAAGACGAACAAAAGAAGCAGCAACACCTCGCTGAATCGATGCTTCATGGGAAGATGAGCTATGGGAGAGGCCCCGAAGACGAAGATAATGCTCAATTTCCTCCGGTTATAACGAGCGCGAGATCTCGACCGGTGAGCGGCGAGTTTCCGATTTCCAATCATAATCATGGAGATCAAATGTTATCGTCTTCGATCCATAAACGCATACATCCTTATCCGGTGTCCGAGCCGGGTAGTGCGAGGTGGGATGAAAAGAAAGAGGGAGGGTGGAAAGAGCGCATGGATGATTGGAAAGCCATGCAAGGAAATCTGGGAACTGATCATCATGATGATGCAGTGGACCCGGACATGCCTATGATGGATGAAGCAAGGCAGCCGCTTTCAAGAAAAGTACCGATCGCCTCAAGCCGGGTCAACCCATATCGTATGGTGATCGTGATTCGGCTAGTAGTCCTTGCTTTCTTTCTCCGATATAGAATCCTGAACCCGGTACACGACGCTATCGGCCTCTGGCTCACTTCTGTGGCATGTGAGATATGGTTTGCCTTCTCATGGATCCTTGATCAGTTCCCCAAATGGTTTCCCATCGACCGCGAAACCTATCTCGATCGTCTTTCTCTCAGATATGAGAAGGAAGGCGAGCCATCGATGCTTTCTCCGGTCGATATATTTGTCAGCACTGTGGATCCCTTGAAGGAACCTCCTCTAGTTACAGCAAACACTGTGCTTTCAATCTTAGCAATGGACTATCCTGTTGATAAGGTCTCATGTTACGTATCTGACGATGGAGCCTCCATGCTCACATTTGAATCGCTCTCCGAAACTGCTGAATTCGCTCGGAAATGGGTTCCTTTCTGTAAGAAATTTGCGATTGAGCCTCGAGCGCCGGAGATGTATTTCTCTCTCAAGATTGACTATCTCAAGGACAAAGTTCAGCCGACTTTCGTCAAGGAGCGTCGAGCTATGAAGAGAGAATACGAAGAATTTAAGGTTCGGGTCAATGCACTTGTTGCCAAAGCATTGAAGGCTCCTCCAGAAGGGTGGATCATGCAAGATGGTACACCATGGCCTGGAAATAATACCCGTGATCATCCAGGTATGATCCAAGTCTTTCTTGGTCACAGTGGTGGTCATGATACTGAAGGCAATGAGCTCCCTCGCCTTGTTTACGTCTCTCGTGAGAAGAGGCCAGGATTTCAACATCACAAGAAAGCTGGAGCCATGAATGCACTGGTTCGCGTTTCTGCTGTGCTTACGAATGCTCCTTTCATGCTGAACTTGGATTGCGATCACTATGTTAATAACAGCAAGGCTGCCCGAGAGGCGATGTGTTTCTTGATGGACCCGCAGATCGGGAAGAAATTGTGTTATGTCCAGTTCCCTCAGAGATTCGACGGCATTGACAGGAATGATCGATATGCCAACAGAAACACTGTCTTCTTTGATATTAACATGAAAGGCCTAGACGGAATTCAGGGTCCGGTGTATGTCGGTACTGGATGCGTCTTCAGAAGACAAGCTTTGTATGGTTACGACCCGCCGAAGGGTCCTAAACGTCCAAAGATGGTAAGTTGTGACTGCTGCCCATGTTTCGGACGCCGTAGAAAGCTTCAGAAGTATTCTAAACATGGAACAAGTGGAGTCGGTGTAAATGGAGACGAATCTGGTGGCCCCAGCCTTCAAGGATACGACGAAGATAAGGAGCTGTTGATGTCCCAGATGAATTTCGAGAAAAGATTCGGACAATCAGCGGCATTCGTGACTTCAACACTAATGGAGCAAGGTGGAGTCCCTCCCTCCTCAAGTCCGGCCGCTCTTCTCAAAGAAGCCATTCATGTAATTAGCTGCGGCTACGAAGATAAAACCGAATGGGGTCTTGAGTTGGGTTGGATCTATGGGTCTATCACGGAAGACATTCTAACGGGTTTCAAGATGCATTGCCGGGGTTGGAGATCCATATACTGCATGCCCAAGAGGGCAGCATTCAAGGGGTCAGCGCCTATCAACTTGTCTGATCGTCTCAACCAGGTCCTCCGATGGGCTCTTGGTTCCGTTGAAATCTTCTTCAGTCGCCACAGCCCCGTCTGGTATGGCTACAAGGGAGGAAACCAGCTCAAGTGGCTCGAGCGTTTCGCATATGTCAACACCACTATCTACCCATTCACCTCCTTACCTCTCCTTGCATATTGCACCCTCCCAGCCATTTGCTTGCTCACCGGCAAATTCATCATGCCTACGATTAGCACGTTTGCAAGTCTGTTCTTCATTTCGCTCTTCATCTCAATCTTTGCAACGGGCATCCTGGAGCTGAGATGGAGCGGAGTGAGCATCGAGGAATGGTGGAGGAACGAGCAATTCTGGGTCATTGGTGGTGTGTCAGCACATCTCTTTGCAGTCATACAGGGTCTTCTCAAGGTCTTGGCTGGAATTGATACCAACTTCACTGTCACATCCAAGGCAACTGATGATGAGGATTTCGGAGAGCTATACGCCTTCAAGTGGACCACCCTCCTGATTCCTCCCACCACTCTCCTAATCATCAACCTTGTTGGAGTTGTCGCTGGAATATCTGATGCCATAAACAATGGTTACCAATCATGGGGTCCACTGTTCGGAAAGCTCTTCTTTGCCTTCTGGGTGATCGTCCATCTCTACCCATTCCTCAAAGGTCTAATGGGACGGCAGAACAGGACCCCAACCATTGTTGTCATCTGGTCTGTGCTTTTAGCTTCTATCTTCTCCTTGCTCTGGGTTCGAATCGACCCGTTTGTCATAAAAGCGAAGGGACCTGATGTTAAACAATGCGGAATCAATTGTTGA 3159 0.4891 MEASAGLVAGSHNRNELVVIHGHEEPKPLKALNGQVCEICGDEIGITTEGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIEDEQKKQQHLAESMLHGKMSYGRGPEDEDNAQFPPVITSARSRPVSGEFPISNHNHGDQMLSSSIHKRIHPYPVSEPGSARWDEKKEGGWKERMDDWKAMQGNLGTDHHDDAVDPDMPMMDEARQPLSRKVPIASSRVNPYRMVIVIRLVVLAFFLRYRILNPVHDAIGLWLTSVACEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEKEGEPSMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFAIEPRAPEMYFSLKIDYLKDKVQPTFVKERRAMKREYEEFKVRVNALVAKALKAPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQIGKKLCYVQFPQRFDGIDRNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVSCDCCPCFGRRRKLQKYSKHGTSGVGVNGDESGGPSLQGYDEDKELLMSQMNFEKRFGQSAAFVTSTLMEQGGVPPSSSPAALLKEAIHVISCGYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPVWYGYKGGNQLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPTISTFASLFFISLFISIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEDFGELYAFKWTTLLIPPTTLLIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVIKAKGPDVKQCGINC* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00173 1052 SUPERFAMILY Nucleotide-diphospho-sugar transferases 348 851 IPR029044 -
Eupl10g00173 1052 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Eupl10g00173 1052 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 237 1019 - -
Eupl10g00173 1052 Pfam Zinc-binding RING-finger 27 103 IPR027934 -
Eupl10g00173 1052 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Eupl10g00173 1052 Pfam Cellulose synthase 334 1046 IPR005150 GO:0016020|GO:0016760|GO:0030244
Eupl10g00173 1052 Coils Coil 432 452 - -
Eupl10g00173 1052 CDD mRING-HC-C4C4_CesA 35 85 - -
Eupl10g00173 1052 FunFam Cellulose synthase 19 110 - -
Eupl10g00173 1052 FunFam Cellulose synthase 451 625 - -
Eupl10g00173 1052 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 475 625 IPR029044 -
Eupl10g00173 1052 SUPERFAMILY RING/U-box 21 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00173 Eupl-Chr10 13831095 13836974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00173 1 1052 Cell Wall Biosynthesis AT5G17420 84.316 0.0 1821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00173 K10999 - aew:130792056 1948.71