Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00171 ATGGTCTTCAAGAAAACCTTGTATCTTCTACTCCAATTTACAGTTCTAGCTTTTAGCCACCAATTCACTGGCGCACAACACCACCACCACCACCAACAACACTCCTTAGTCACTGATAAAGATGCTCTTCTAGCCTTTAGAACTGTAATATCCGACCCAGATTCTATACTAGCAAACTGGAATAAAACCTCACATGTTTGCAAATTCACTGGTGTCATTTGCGACAAATGGCACCATCGGGTGATTCTTCTCCGGCTCAATCGTACCAATATTAAGGGATTGCTTTCCCCCTTCATTGCTAATCTCACCGGCCTACGTAAACTTGACCTCGCATATAACTACTTACATGGCTCTATTCCACCCGAATTCGGCTACTTACGACACCTACATTACCTAAGGCTTGAGGGGAACGCTCTGCGTGGTCCAATTCCGGAGACTTTCTCCCTCCTTCCCAATATTACTTATTTCAACATTGGAAGCAACTACTTAACAGGTACAATTCCAGCAATCATCTTCTCCAATTGCACTTCCTTGCACACTGTAGACTTCTCCAACAACTCTCTCACCGGCGAAATTCCAGCAGAGATTGGAACCCCACCAGAAATATGGGTCATCAATTTATTTTTCAATAACTTGACTGGAAAAATTCCTGCGTCTGTATCGAACTTGTCAGAGTTGGTCTCTTTGGATGTCGAGAGCAACCATCTTTCTGGTGAATTGCCATCAGAAGCTGTAGTGAATCTACAATACATGGAGTTCCTTCATTTATCATACAATGATATGGTTAGCCATGATCACAACACTAATCTCGAGCCATTCTTCGACTCTCTCTTGAACTGCACCTATCTAGCTGAGATCGAATTGGCTGGTATGAGCCTTGGAGGAAGGTTGCCCAATTCCATTGGTCAGCTTGGGAGTTATATATCACAGATCCATCTAGAAGATAACCGAATCTCTGGATCAATCCCTCCAAGTATAGCAAACTTGAACCTGACGCTGCTCAACTTGTCGAGCAACCTTCTTAGCGGAACGATTCCAGTAGAGATTGCTCAGATAAAGTACCTAGAGCAGATAATCTTGTCTAACAACTCTTTAAGCGGTGCGATTCCAGCCACATTAGGAGAGATTGCTTCAATTGGTTTGCTTGATTTATCGAGGAACAGATTATCTGGTGAGATTCCGGCAAGTCTAGGAGATCTAAATCAACTGTATTTTTTATTCCTTAACAACAACTTGCTTTCAGGGGGAATACCACCTAGCCTAGGTAGGTGTAGGAACTTGCACAAGCTAGACTTGTCCTATAACAGATTAACAGGAAACATCCCACAAAACATATCTGAACTAAGTGAAATCAGAATATTCATGAATTTTTCACATAATCTTCTACAAGGGCCTTTGCCGATTGAGATTAGCAAGATGGCATCAGTCCAAGAGATCGATCTGTCGTCAAACAACTTCACTGGAAACATCTTTCCCCAAATATCAAGCTGTATTGCAGTAAAGCTGATCAATCTCTCACACAATTCTCTTCATGGACCGCTTCCAGAATCCTTAGGTGAGCTTCGAAACCTCGAGTGCCTTGACCTATCTAACAATTCCTTAACCGCAAACATCCCAATAAGCCTCAGTAAATGCGCTAGCCTCACACTCTTGAATCTTTCGTTTAATGACTTCGATGGGTCGATACCCACCGGTGGCATCTTCAATTTGGTCACAAATCTTAGCTTCTTAGGCAATCCGCATCTATGTGGCTCACTTCCAGGAATACCTAGTTGCTCGAAAAGGCAACATTGGTCACGTTCACGCAGGTTCTTGATCGTCGTTTCCACTGTTGTATCTGCATCAGTATTCCTTTCAACAGCATGTTGCGTGATCGGATTTCGACACATCAAAGGAATAATTTCCTCTGGGAAAGATGAGATGTTCAGCAGTTCGACGCCAGCATTGAAGCTTAACTTCCCAAGAATCACTTACAAAGAACTCTCAGATGCAACTGAAGGATTTGATGAAGGGAGACTTATTGGGTCAGGTAGCTACGGACGCGTCTACAGAGGGGTTCTAGGGGATGGGACTGTTGTGGCCATCAAAGTGTTGCAGTTGCAAACTGGCAATTCTACAAAGAGCTTCAATAGGGAATGCCAAGTCTTAAAGAGAATTCGACACCGGAACCTGATGCGGATTATAACAGCATGTAGTCTACCGGATTTTAAGGCTCTAGTTCTTCCTTATATGGCAAATGGAAGCTTGGATAGCCGTCTCTATCCACACCAGGGTACTGGTTTTGGTTCGGGTTCTTCGGATTTGAGTTTGATCCAGAGGCTAAACATCTGCAGTGATATAGCTGAAGGGATGGCTTATTTGCACCACCATTCTCCTGTTAAGGTTATACATTGTGATTTGAAGCCGAGCAATGTTCTTCTCAACGACGACATGACTGCCTTGGTTTCTGATTTTGGAATTGCAAAGTTGGTGATGACGGTTGGAGTGGGGACTGCTGCTGCTGTTGAGAACATGGGGAACTCTACTGCAAATATGTTATGTGGGTCTATTGGATACATTGCACCAGAGTATGGATACGGATCAAATGCATCCACAAAGGGAGACGTTTATAGCTTTGGAATTTTAGTGCTTGAGATGGTTACTAGAAAGAGACCCATTGATGACATGTTTGGTGGTGGGCTGAGCCTTCACAAATGGGTGAAGACTCACTATCATGGGAGGGTAGAGAAGGTGATAGACTCTTCCTTGATAAGAGCTGCAAAGGACCAGGCCCCTGAAGCCAAGAAGATGTGGGAAGTCGCGATTGGTGAACTGATCGAATTGGGTCTCCTCTGCACCCAAGAGGCCTCTTCAACTAGGCCCACAATGCTTGATGCTGCTGATGACTTGGATCGCCTGAAGCGATACCTTAGTGGTGACACAACTGCGACATTCGCCTCTTCTCTTGGGATATCGTCTTCTACCTTGGGTGAGGATTGA 2979 0.4408 MVFKKTLYLLLQFTVLAFSHQFTGAQHHHHHQQHSLVTDKDALLAFRTVISDPDSILANWNKTSHVCKFTGVICDKWHHRVILLRLNRTNIKGLLSPFIANLTGLRKLDLAYNYLHGSIPPEFGYLRHLHYLRLEGNALRGPIPETFSLLPNITYFNIGSNYLTGTIPAIIFSNCTSLHTVDFSNNSLTGEIPAEIGTPPEIWVINLFFNNLTGKIPASVSNLSELVSLDVESNHLSGELPSEAVVNLQYMEFLHLSYNDMVSHDHNTNLEPFFDSLLNCTYLAEIELAGMSLGGRLPNSIGQLGSYISQIHLEDNRISGSIPPSIANLNLTLLNLSSNLLSGTIPVEIAQIKYLEQIILSNNSLSGAIPATLGEIASIGLLDLSRNRLSGEIPASLGDLNQLYFLFLNNNLLSGGIPPSLGRCRNLHKLDLSYNRLTGNIPQNISELSEIRIFMNFSHNLLQGPLPIEISKMASVQEIDLSSNNFTGNIFPQISSCIAVKLINLSHNSLHGPLPESLGELRNLECLDLSNNSLTANIPISLSKCASLTLLNLSFNDFDGSIPTGGIFNLVTNLSFLGNPHLCGSLPGIPSCSKRQHWSRSRRFLIVVSTVVSASVFLSTACCVIGFRHIKGIISSGKDEMFSSSTPALKLNFPRITYKELSDATEGFDEGRLIGSGSYGRVYRGVLGDGTVVAIKVLQLQTGNSTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSRLYPHQGTGFGSGSSDLSLIQRLNICSDIAEGMAYLHHHSPVKVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGTAAAVENMGNSTANMLCGSIGYIAPEYGYGSNASTKGDVYSFGILVLEMVTRKRPIDDMFGGGLSLHKWVKTHYHGRVEKVIDSSLIRAAKDQAPEAKKMWEVAIGELIELGLLCTQEASSTRPTMLDAADDLDRLKRYLSGDTTATFASSLGISSSTLGED* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00171 992 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 65 264 - -
Eupl10g00171 992 ProSiteProfiles Protein kinase domain profile. 668 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00171 992 Gene3D Ribonuclease Inhibitor 263 600 IPR032675 -
Eupl10g00171 992 Gene3D Phosphorylase Kinase; domain 1 648 743 - -
Eupl10g00171 992 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Eupl10g00171 992 Pfam Protein kinase domain 669 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00171 992 Gene3D Transferase(Phosphotransferase) domain 1 744 978 - -
Eupl10g00171 992 SUPERFAMILY L domain-like 330 584 - -
Eupl10g00171 992 PRINTS Leucine-rich repeat signature 427 440 - -
Eupl10g00171 992 PRINTS Leucine-rich repeat signature 521 534 - -
Eupl10g00171 992 SMART serkin_6 668 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00171 992 Gene3D Ribonuclease Inhibitor 174 262 IPR032675 -
Eupl10g00171 992 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 648 743 - -
Eupl10g00171 992 ProSiteProfiles Leucine-rich repeat profile. 426 449 IPR001611 GO:0005515
Eupl10g00171 992 Pfam Leucine Rich Repeat 426 448 IPR001611 GO:0005515
Eupl10g00171 992 ProSiteProfiles Leucine-rich repeat profile. 523 546 IPR001611 GO:0005515
Eupl10g00171 992 Gene3D Ribonuclease Inhibitor 35 173 IPR032675 -
Eupl10g00171 992 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Eupl10g00171 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Eupl10g00171 992 FunFam LRR receptor-like serine/threonine-protein kinase EFR 310 597 - -
Eupl10g00171 992 SUPERFAMILY Protein kinase-like (PK-like) 647 963 IPR011009 -
Eupl10g00171 992 Pfam Leucine rich repeat 501 558 IPR001611 GO:0005515
Eupl10g00171 992 CDD STKc_IRAK 674 966 - -
Eupl10g00171 992 SMART LRR_typ_2 425 448 IPR003591 -
Eupl10g00171 992 SMART LRR_typ_2 102 125 IPR003591 -
Eupl10g00171 992 SMART LRR_typ_2 223 247 IPR003591 -
Eupl10g00171 992 SMART LRR_typ_2 126 149 IPR003591 -
Eupl10g00171 992 SMART LRR_typ_2 521 545 IPR003591 -
Eupl10g00171 992 SMART LRR_typ_2 400 424 IPR003591 -
Eupl10g00171 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 174 964 - -
Eupl10g00171 992 SUPERFAMILY L domain-like 37 263 - -
Eupl10g00171 992 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 744 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00171 Eupl-Chr10 13531697 13535128 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00171 38 953 Receptor kinase-like Gene Family AT3G47570 34.627 5.26e-167 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl10g00171 Pkinase 5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00171 - - nnu:104609218 1390.94