Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00161 ATGGCTTTTGTGCTCTGTCATTTTCTCCCCCTCTTGCTTGGTTTTCTTCTGCCGCTCTTGGCTGTTGCTCAATACGAAATAATCTTGGGCTCATCTCTCTCTGCTGATGACAACTCCTCATGGCTTTCACCTTCTGGCGATTACGCCTTTGGATTCCGTCGCCAAATGAATGACGTCGATAGCTTCTTGCTTGCCATCTGGTTCGACAAAATACCTGACAAAACCATTGTATGGTACGCAAATGGAGATAATCTGGCTCCAAGAGGATCGAAAGTCGTGCTTACGAGTGGTGGCCAACTTGTGCTCAATGATCCTCAAGGCAAAGAGATATGGAAAGCAGAATTAAACAGTACTGATGGAGTCGCTTACGGTGCGATGCTCAACACCGGGAACTTTGTGCTTGCAGGTTATGATTCTCGTTCTGTGTGGGAAAGCTTTAAGAAACCTACCGACACCATATTGCCTTCACAGATATTGGAAATTGGTGACAAGCTTTCTTCTCGACAGAAGGAGGCCAACTACTCGAAGGGAAGATTCCAGCTTCGTCTACTCCCAGACGGAAATCTTGTACTTAATTCAATAGGCTTGCCAACTGAAACTGCTTATGATGCTTATTATATCAGTAACACTTATGAGGCCGATAGAAACTATTCCGGACATCGAGTTGTCTTCAATGAGTCCGGCTACATTTATATTGTGAGAAAGAATGGAAACAGATTCAACCTTACATCGACGAACATAGTTCCTATCACAGACTTCTACTACAGAGCGACGCTGGATTTTGATGGAGTTTTCACGCAATACGCTCACCCAAGGAACACCGCTGGTGACAACAGACGCTGGTTCAATGTGTGGTTCATGCCCGATGATATTTGTGCTGCAATTCCTGCTGTTAAATTGGGCAGCGGTGCTTGTGGGTTTAATAGCTACTGCACCCTTACATCAGATAGGAGACCTTATTGTCAATGCCTACCTGACTACTCCTTCGTTGATCCAAATAACAACTTCAGCGATTGCCAACCAAAATTCTCACAAGGATGTCCGGAAGATGGGTCAAGAACCCCCGAGGATCTATTTGATATGCGGGTGATGGAGAACTTGAATTTTCCAATGGGAGACTACCACAAATTTGAATCTTATAATGAAGAGGACTGCAAAAAATCTTGCTTGCATGATTGTTTCTGTGCAGTTGCCATTTTTGGAACAGAATGTTGGAAGAAGAAGCTACCCCTATCAAACGGCAGGAGGGAAAGAGGAGCACTGGCTCTCATAAAAGTAAGGAAAGCTGATTCTCTTCAAGAAGATCCTCATCCTCCAATTTCAGGCCAAGGCAAGAATGATCAAGCGAAGTTAATCCTTTTAGATATCTCTGCTTCTTTCAACTTCGTATTGCTGTCCATTGTTACTATGGTTGTCTTCTTCACGTACCACAAGAAATTGAACAAAACTAACCCAGATGCAAGTCTTTTAGAAACAAATCTACCTTCTTTCACTTACAAAGAACTCCAAGAAGCTACAGATGGGTTCAAGGAGGAACTGGGCAAGGGTGCTTTTGGAGTTGTTTATAAAGGGGTTTTAGCATTAAGTTCAAAAAAATTTGTCGCGGTCAAGAAGTTAGACAATATGGTTGAAGAACGTGAGAAGGAATTCAAAACAGAAGTGAGTGTGATTGGCCAGACCCATCATAAGAATCTGGTCCGATTGCTTGGATTCTGTGAGGAAGGTCCAAACCGGCTTCTGGTATACGAGTTCATGAGCAATGGCTCTTTAGCAAGTTTCCTCTTTGGAATTTCGAAGCCTGATTGGAACCAAAGAACAGAGATTGCATTCGGCATTGCAAGAGGGCTCATGTACTTACACGAGGAGTGCAGCACCCAGATCATCCATTGTGATATAAAGCCTCAGAACATCCTTCTTGATGATTGTTTTAAGGCAAAGATTTCTGATTTTGGACTGGCAAAGCTTTTGATGTCTGACCAGAGTCTAACTCGTACAGTTATCAGAGGAACTAGAGGGTATGTCGCACCCGAATGGTTCAGGAACATACCAATTACAACGAAGGTCGATGTTTATAGTTTTGGTGTCATGTTACTAGAGATCATATGTTGTAGGAAGAGTATGGAGTTGGACTTGGAGGACGAAGGAAGAGCAATACTAACAGATTGGTCTTACGATTGCTTTATAGAAAGGAAACTGAATGATTTGGTTGAGAATGATGAGGAGGCAATGAAAGACATGAGAAGGCTGGAAATGTTAGTGATGATAGCAATTTGGTGTATTCAAGAGGAGCCATCGCTAAGGCCTACGATGAAGAAGGTCACACAGATGCTAGAAGGAGATGTTGAAGTTTCTGTTCCCCCATGCCCCTGTCCCTTTACCTCAGTCGGTTGA 2391 0.432 MAFVLCHFLPLLLGFLLPLLAVAQYEIILGSSLSADDNSSWLSPSGDYAFGFRRQMNDVDSFLLAIWFDKIPDKTIVWYANGDNLAPRGSKVVLTSGGQLVLNDPQGKEIWKAELNSTDGVAYGAMLNTGNFVLAGYDSRSVWESFKKPTDTILPSQILEIGDKLSSRQKEANYSKGRFQLRLLPDGNLVLNSIGLPTETAYDAYYISNTYEADRNYSGHRVVFNESGYIYIVRKNGNRFNLTSTNIVPITDFYYRATLDFDGVFTQYAHPRNTAGDNRRWFNVWFMPDDICAAIPAVKLGSGACGFNSYCTLTSDRRPYCQCLPDYSFVDPNNNFSDCQPKFSQGCPEDGSRTPEDLFDMRVMENLNFPMGDYHKFESYNEEDCKKSCLHDCFCAVAIFGTECWKKKLPLSNGRRERGALALIKVRKADSLQEDPHPPISGQGKNDQAKLILLDISASFNFVLLSIVTMVVFFTYHKKLNKTNPDASLLETNLPSFTYKELQEATDGFKEELGKGAFGVVYKGVLALSSKKFVAVKKLDNMVEEREKEFKTEVSVIGQTHHKNLVRLLGFCEEGPNRLLVYEFMSNGSLASFLFGISKPDWNQRTEIAFGIARGLMYLHEECSTQIIHCDIKPQNILLDDCFKAKISDFGLAKLLMSDQSLTRTVIRGTRGYVAPEWFRNIPITTKVDVYSFGVMLLEIICCRKSMELDLEDEGRAILTDWSYDCFIERKLNDLVENDEEAMKDMRRLEMLVMIAIWCIQEEPSLRPTMKKVTQMLEGDVEVSVPPCPCPFTSVG* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00161 796 SMART serkin_6 507 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00161 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Eupl10g00161 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 21 147 - -
Eupl10g00161 796 CDD B_lectin 30 146 IPR001480 -
Eupl10g00161 796 SUPERFAMILY Protein kinase-like (PK-like) 488 778 IPR011009 -
Eupl10g00161 796 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Eupl10g00161 796 SMART blect_4 32 149 IPR001480 -
Eupl10g00161 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 785 - -
Eupl10g00161 796 Pfam D-mannose binding lectin 75 162 IPR001480 -
Eupl10g00161 796 Pfam Protein kinase domain 510 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00161 796 Gene3D Transferase(Phosphotransferase) domain 1 585 787 - -
Eupl10g00161 796 Gene3D Phosphorylase Kinase; domain 1 470 584 - -
Eupl10g00161 796 FunFam Uncharacterized protein 149 278 - -
Eupl10g00161 796 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 789 - -
Eupl10g00161 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 198 IPR036426 -
Eupl10g00161 796 ProSitePatterns Protein kinases ATP-binding region signature. 513 538 IPR017441 GO:0005524
Eupl10g00161 796 PIRSF SRK 1 796 IPR024171 GO:0004674
Eupl10g00161 796 FunFam Serine/threonine-protein kinase 150 295 - -
Eupl10g00161 796 CDD STKc_IRAK 513 779 - -
Eupl10g00161 796 Gene3D - 149 275 IPR036426 -
Eupl10g00161 796 Coils Coil 732 752 - -
Eupl10g00161 796 Gene3D - 22 148 IPR036426 -
Eupl10g00161 796 ProSiteProfiles Protein kinase domain profile. 507 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00161 796 FunFam S-receptor-like serine/threonine-protein kinase 476 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00161 Eupl-Chr10 13172373 13175114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00161 472 780 Receptor kinase-like Gene Family AT1G60800 42.405 1.31e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl10g00161 Pkinase 7.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00161 - - nnu:104603603 960.288