Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00158 ATGGTCTTCAAGAAAACCTTGTATCTTCTACTCCAATTTACAGTTCTAGCTTTTAGCCACCAATTCACTGGCGCACAACACCACCACCACCACCAACAACACTCCTTAGTCACTGATAAAGATGCTCTTCTAGCCTTTAGAACTGTAATATCCGACCCAGATTCTATACTAGCAAACTGGAATAAAACCTCACATGTTTGCAAATTCACTGGTGTCATTTGCGACAAATGGCACCATCGGGTGATTCTTCTCCGGCTCAATCGTACCAATATTAAGGGATTGCTTTCCCCCTTCATTGCTAATCTCACCGGCCTACGTAAACTTGACCTCGCATATAACTACTTACATGGCTCTATTCCACCCGAATTCGGCTACTTACGACACCTACATTACCTAAGGCTTGAGGGGAACGCTCTGGGTGGTCCAATTCCGGAGACTTTCTCCCTCCTTCCCAATATTACTTATTTCAACATTGGAAGCAACTACTTAACAGGTACAATTCCAGCAATCATCTTCTCCAATTGCACTTCCTTGCACACTGTAGACTTCTCCAACAACTCTCTCACCGGCGAAATTCCAGCAGAGATTGGAACCCCACCAGAAATATGGGTCATCAATTTATTTTTCAATAACTTGACTGGAAAAATTCCTGCGTCTGTATCGAACTTGTCAGAGTTGGTCTCTTTGGATGTCGAGAGCAACCATCTTTCGGGTGAATTGCCATCAGAAGCTGTAGTGAATCTACAATACATGGAGTTCCTTCATTTATCATACAATGATATGGTTAGCCATGATCACAACACTAATCTCGAGCCATTCTTCGACTCTCTCTTGAACTGCACCTATCTAGCTGAGATCGAATTGGCTGGTATGAGCCTTGGAGGAAGATTGCCCAATTCCATTGGTCAGCTAGGGAGTTATATATCACAGATCCATCTAGAAGATAACCGAATCTCTGGATCAATCCCTCCAAGTATAGCAAACTTGAACCTGACGCTGCTCAACTTGTCGAGCAACCTTCTTAGCGGAACGATTCCAGTAGAGATTGCTCAGATAAAGTACCTTGAGCAGATAATCTTGTCTAACAACTCTTTAAGCGGTGCGATTCCAGCCACATTAGGAGAGATTGCTTCAATTGGTTTGCTTGATTTATCGAGGAACAGATTATCTGGTGAGATTCCGGCAAGTCTAGGAGATCTAAATCAACTGTATTTTTTATTCCTTAACAACAACTTGCTTTCAGGGGGAATACCACCTAGCCTAGGTAGGTGTAGGAACTTGCACAAGCTAGACTTGTCCTATAACAGATTAACAGGAAACATCCCACAAAACATATCTGAACTAAGTGAAATCAGAATATTCATGAATTTTTCACATAATCTTCTACAAGGGCCTTTGCCGATTGAGATTAGCAAGATGGCATCAGTCCAAGAGATCGATCTGTCGTCAAACAACTTCACTGGAAACATCTTTCCCCAAATATCAAGCTGTATTGCAGTAAAGCTGATCAATCTCTCACACAATTCTCTTCATGGACCGCTTCCAGAATCCTTAGGTGAGCTTCGAAACCTCGAGTGCCTTGACCTATCTAACAATTCCTTAACCGCAAACATCCCAATAAGCCTCAGTAAATGCGCTAGCCTCACACTCTTGAATCTTTCGTTTAATGACTTCGATGGGTCGATACCCACCGGTGGCATCTTCAATTTGGTCACAAATCTTAGCTTCTTAGGCAATCCGCATCTATGTGGCTCACTTCCAGGAATACCTAGTTGCTCGAAAAGGCAACATTGGTCACGTTCACGCAGGTTCTTGATCGTCGTTTCCACTGTTGTATCTGCATCAGTATTCCTTTCAACAGCATGTTGCGTGATCGGATTTCGACACATCAAAGGAATAATTTCCTCTGGGAAAGATGAGATGTTCAGCAGTTCGACGCCAGCATTGAAGCTTAACTTCCCAAGAATCACTTACAAAGAACTCTCAGATGCAACTGAAGGATTTGATGAAGGGAGACTTATTGGGTCAGGTAGCTACGGACGCGTCTACAGAGGGGTTCTAGGGGATGGGACTGTTGTGGCCATCAAAGTGTTGCAGTTGCAAACTGGCAATTCTACAAAGAGCTTCAATAGGGAATGCCAAGTCTTAAAGAGAATTCGACACCGGAACCTGATGCGGATTATAACAGCATGTAGTCTACCGGATTTTAAGGCTCTAGTTCTTCCTTATATGGCAAATGGAAGCTTGGATAGCCGTCTCTATCCACACCAGGGTACTGGTTTTGGTTCGGGTTCTTCGGATTTGAGTTTGATCCAGAGGCTAAACATCTGCAGTGATATAGCTGAAGGGATGGCTTATTTGCACCACCATTCTCCTGTTAAGGTTATACATTGTGATTTGAAGCCGAGCAATGTTCTTCTCAACGACGACATGACTGCCTTGGTTTCTGATTTTGGAATTGCAAAGTTGGTGATGACGGTTGGAGTGGGGACTGCTGCTGCTGTTGAGAACATGGGGAACTCTACTGCAAATATGTTATGTGGGTCTATTGGATACATTGCACCAGGTACCATTTTTCTTCTCTCTTGCTCTTGA 2595 0.4335 MVFKKTLYLLLQFTVLAFSHQFTGAQHHHHHQQHSLVTDKDALLAFRTVISDPDSILANWNKTSHVCKFTGVICDKWHHRVILLRLNRTNIKGLLSPFIANLTGLRKLDLAYNYLHGSIPPEFGYLRHLHYLRLEGNALGGPIPETFSLLPNITYFNIGSNYLTGTIPAIIFSNCTSLHTVDFSNNSLTGEIPAEIGTPPEIWVINLFFNNLTGKIPASVSNLSELVSLDVESNHLSGELPSEAVVNLQYMEFLHLSYNDMVSHDHNTNLEPFFDSLLNCTYLAEIELAGMSLGGRLPNSIGQLGSYISQIHLEDNRISGSIPPSIANLNLTLLNLSSNLLSGTIPVEIAQIKYLEQIILSNNSLSGAIPATLGEIASIGLLDLSRNRLSGEIPASLGDLNQLYFLFLNNNLLSGGIPPSLGRCRNLHKLDLSYNRLTGNIPQNISELSEIRIFMNFSHNLLQGPLPIEISKMASVQEIDLSSNNFTGNIFPQISSCIAVKLINLSHNSLHGPLPESLGELRNLECLDLSNNSLTANIPISLSKCASLTLLNLSFNDFDGSIPTGGIFNLVTNLSFLGNPHLCGSLPGIPSCSKRQHWSRSRRFLIVVSTVVSASVFLSTACCVIGFRHIKGIISSGKDEMFSSSTPALKLNFPRITYKELSDATEGFDEGRLIGSGSYGRVYRGVLGDGTVVAIKVLQLQTGNSTKSFNRECQVLKRIRHRNLMRIITACSLPDFKALVLPYMANGSLDSRLYPHQGTGFGSGSSDLSLIQRLNICSDIAEGMAYLHHHSPVKVIHCDLKPSNVLLNDDMTALVSDFGIAKLVMTVGVGTAAAVENMGNSTANMLCGSIGYIAPGTIFLLSCS* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00158 864 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 65 264 - -
Eupl10g00158 864 SMART LRR_typ_2 425 448 IPR003591 -
Eupl10g00158 864 SMART LRR_typ_2 102 125 IPR003591 -
Eupl10g00158 864 SMART LRR_typ_2 126 149 IPR003591 -
Eupl10g00158 864 SMART LRR_typ_2 223 247 IPR003591 -
Eupl10g00158 864 SMART LRR_typ_2 521 545 IPR003591 -
Eupl10g00158 864 SMART LRR_typ_2 400 424 IPR003591 -
Eupl10g00158 864 SUPERFAMILY L domain-like 37 264 - -
Eupl10g00158 864 Pfam Leucine rich repeat 501 558 IPR001611 GO:0005515
Eupl10g00158 864 FunFam LRR receptor-like serine/threonine-protein kinase EFR 310 597 - -
Eupl10g00158 864 SMART serkin_6 668 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00158 864 Gene3D Phosphorylase Kinase; domain 1 648 743 - -
Eupl10g00158 864 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 247 857 - -
Eupl10g00158 864 Gene3D Ribonuclease Inhibitor 172 262 IPR032675 -
Eupl10g00158 864 ProSiteProfiles Leucine-rich repeat profile. 426 449 IPR001611 GO:0005515
Eupl10g00158 864 Gene3D Ribonuclease Inhibitor 263 600 IPR032675 -
Eupl10g00158 864 Pfam Protein kinase domain 669 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00158 864 ProSiteProfiles Leucine-rich repeat profile. 523 546 IPR001611 GO:0005515
Eupl10g00158 864 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Eupl10g00158 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Eupl10g00158 864 Gene3D Ribonuclease Inhibitor 35 171 IPR032675 -
Eupl10g00158 864 SUPERFAMILY Protein kinase-like (PK-like) 647 858 IPR011009 -
Eupl10g00158 864 SUPERFAMILY L domain-like 330 584 - -
Eupl10g00158 864 Pfam Leucine Rich Repeat 426 448 IPR001611 GO:0005515
Eupl10g00158 864 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Eupl10g00158 864 PRINTS Leucine-rich repeat signature 521 534 - -
Eupl10g00158 864 PRINTS Leucine-rich repeat signature 427 440 - -
Eupl10g00158 864 Gene3D Transferase(Phosphotransferase) domain 1 744 860 - -
Eupl10g00158 864 ProSiteProfiles Protein kinase domain profile. 668 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00158 864 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 648 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00158 Eupl-Chr10 13068070 13070862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00158 38 855 Receptor kinase-like Gene Family AT3G47570 34.327 4.84e-144 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl10g00158 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00158 - - nnu:104609218 1160.98