Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00138 ATGGAGAAGATCATAAACTGGGTGGTTCTGCTTCTTCATCTGTCCTTCCTCCTTGTTAAGCTCCAAAGGGGAAGTTGCATTAGTAGTAGTAGTAGTACAAGTTTTTCTTCTGATCTGCTAACTAACCAACAACAGCTGGATAGGGTTCTTGAGCTCCCAGGTCAATCCTTCAATGTGAGCTTTGCCCATTACTCTGGCTATGTCACAGTCAACGAGGAGAGTGGGAGGGCACTCTTCTACTGGTTCTTTGAGGCTGTTGAGGACCGTTCTTCAAAGCCTCTTCTTCTTTGGCTTAATGGAGGGCCTGGGTGTTCTTCCATTGCTTTTGGGGAGGCAGAGGAAGTAGGCCCTTTTCATATTAACGCTGATGGGAAGACCCTTTATCTGAATCCTTACTCTTGGAATCAAGTGGCCAATGTCCTATTCCTCGACTCCCCCGTTGGTGTTGGTTTTTCCTATTCAAATAATTCCCACGACTTGCTGGACAATGGAGATGAAAGGACTGCCAAGGACTCCTTAGCATTTTTATTGAAGTGGCTTGAGCGATTTCCTCAATATAGAGGAAGGGACTTCTATCTCACAGGAGAAAGCTATGCAGGACATTATGTTCCCCAGCTGGCCCAAGCCATTATGAGATACCACTGGTCAACGGGGGACAAATCAATCAATCTAAAGGGATATATGGTAGGGAATGCTCTGACTGATGATTTCCATGATCACTTGGGTGTTTTCCAATTTATGTGGTCTGCTGGTTTGATTTCCGATCAAACCTACAAGCTTCTGAACATTTTCTGTGACTACGAATCATTTATTCACACCTCATCCCAATGTGATAAGATTCTTGATGCTGCTAGCTTTGAACTTGGAAACATCGACCCGTATAGCATCTTCACCCCTTCCTGCACAAGCAATGGGAACTTTTCGAATAAGCTACTGAAAAGACTTAAATCGGTTGGACGCATGGGTGAAAAGTATGATCCATGCACTGAAGTGCACTCAACTGTTTACTTCAATTTACCTGAAGTTCAAAAGGCGCTTCATGTTGATCTGGCAGTTGCTCCATCCAAGTGGGACACTTGCAGTGATGTAGTAAGTAGTAATTGGAAGGACTCACCTAGGTCGGTACTACACATTTATCATGAGCTTATACGTGCAGGGCTTCGTATTTGGATGTTCAGTGGGGATACAGACACTGTAATCCCAGTTACATCGACCCGGTACAGTATAGACGCTCTAAAGCTTCCGACTGTTTCTCCTTGGCGTGCTTGGTACAATGATGGACAGGTGGGGGGATGGACCCAACAGTATGCAGGCCTCAACTTTGTAACAGTGAGGGGAGCAGGTCATGAAGTTCCTCTGCATAAACCGAAACTTGCGCTTGCGCTCGTTAAGGCATTCTTGTCCGGCAGTCCAATGCCGACCTTATCAGAGTTTAGCTCTTCTTGA 1446 0.4537 MEKIINWVVLLLHLSFLLVKLQRGSCISSSSSTSFSSDLLTNQQQLDRVLELPGQSFNVSFAHYSGYVTVNEESGRALFYWFFEAVEDRSSKPLLLWLNGGPGCSSIAFGEAEEVGPFHINADGKTLYLNPYSWNQVANVLFLDSPVGVGFSYSNNSHDLLDNGDERTAKDSLAFLLKWLERFPQYRGRDFYLTGESYAGHYVPQLAQAIMRYHWSTGDKSINLKGYMVGNALTDDFHDHLGVFQFMWSAGLISDQTYKLLNIFCDYESFIHTSSQCDKILDAASFELGNIDPYSIFTPSCTSNGNFSNKLLKRLKSVGRMGEKYDPCTEVHSTVYFNLPEVQKALHVDLAVAPSKWDTCSDVVSSNWKDSPRSVLHIYHELIRAGLRIWMFSGDTDTVIPVTSTRYSIDALKLPTVSPWRAWYNDGQVGGWTQQYAGLNFVTVRGAGHEVPLHKPKLALALVKAFLSGSPMPTLSEFSSS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00138 481 ProSitePatterns Serine carboxypeptidases, histidine active site. 439 456 IPR033124 GO:0004185
Eupl10g00138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Eupl10g00138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Eupl10g00138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Eupl10g00138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Eupl10g00138 481 Gene3D - 375 469 - -
Eupl10g00138 481 FunFam Carboxypeptidase 375 469 - -
Eupl10g00138 481 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Eupl10g00138 481 FunFam Carboxypeptidase 44 303 - -
Eupl10g00138 481 Gene3D - 328 365 - -
Eupl10g00138 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 456 IPR001563 GO:0004185|GO:0006508
Eupl10g00138 481 Pfam Serine carboxypeptidase 53 469 IPR001563 GO:0004185|GO:0006508
Eupl10g00138 481 Gene3D alpha/beta hydrolase 44 303 IPR029058 -
Eupl10g00138 481 SUPERFAMILY alpha/beta-Hydrolases 47 473 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00138 Eupl-Chr10 12572179 12584726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00138 338 472 Calmodulin-binding Proteins AT2G22960 27.206 3.08e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00138 K16297 - nnu:104609183 775.393