Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00137 ATGGAGAAGATGACAAAATGGGTGATTTTGCTTCTTCATCTGTTCTTTCTCCTTGTTAAGCTCCAAATGGACAGTTGCAGCAGCAGTAGTAGTATTAGTAATAATACAAGTTTTTCTTCTGATATGCTAACTGACCAACAAAAGTTGGACAGGGTTCTTGAGCTTCCAGGTCAGTCCTTCAATGTGAGCTTTGCCCATTACTCTGGGTATGTCACAGTCAATGAAAAGAGAGGGAGGGCACTCTTCTACTGGTTCTTTGAGGCTGTTGAGGACCCTTCTTCAAAGCCTCTTCTTATTTGGCTCAATGGAGGGCCTGGGTGTTCTTCCATTGCTTATGGGGAGGCAGAGGAAGTAGGCCCTTTTCGTATTAAGTCTGACGGGAAGAACCTTTATCTGAATAGTTACTCTTGGAATCAAGTGGCCAATATCATATTCATCGATTCCCCGGTTGGTGTTGGCTTTTCCTATTCAAAAAATTCAGAAGATTTGCTGGACAATGGAGATGAAAGGACTGCCAATGACTTATTAGCATTTCTATTGAAGTGGTTTGAACGATTTCCTCAATATAAAGGAAGGGACTTCTATATTACAGGAGAGAGCTATGCAGGACATTATATTCCCCAGCTGGCCCAAGCCATTACAAGATGCAACTGCTGGTTTGATCTCGATGAAACCTACAAGCTTCTGAACATTTTCTGTGACTCCCAATCATTTATCCACACCTCATCCCAGTGTGATCAGATGATGGATGTTGCTGCCAATGAACTAGGAAACATTGACATTTATAGCATCTTCACCCCTTCCTGCACAGTCAATGGGAACTTTTCAAATAAGCTACTGAAAAGGCTTAATTATGATCCATGCACTCTGAAGCACTCAAGAGTTTACTTCAATTTACGTGAGGTTCAAAAGGCGCTTCATGTTAATCCAGAAGTTGCACCATCCAAGTGGGAGACTTGCAGTGATGTAGTTAATAGAAATTGGAAGGACTCGTTAGGCTCGGAGCTACATATTTATCGTGAGCTTATAAGTGCAGGACTCCGTATTTGGATGTTCAGTGGGGATACCGACACTGTAATCCCAGTTACGTCCACCCGGTACAGTATAGCCGCTCTAAAGCTTCCGACTATTTCTTCGTGGCGTGCTTGGTACGATGATGGGCAGGTGGGGGGATGGACCCAAGAATATGCAGGTCTCACCTTTGTAACAGTGAGGGGAGCAGGTCATGAAGTCCCTCTGCATAAACCCAAACTTGCTCTTGTGCTCATTAAGGCATTCTTGTCGGGAAGCCCAATGCCGACCTTGTCCGAGTTTAGCTCTTCTTGA 1326 0.4389 MEKMTKWVILLLHLFFLLVKLQMDSCSSSSSISNNTSFSSDMLTDQQKLDRVLELPGQSFNVSFAHYSGYVTVNEKRGRALFYWFFEAVEDPSSKPLLIWLNGGPGCSSIAYGEAEEVGPFRIKSDGKNLYLNSYSWNQVANIIFIDSPVGVGFSYSKNSEDLLDNGDERTANDLLAFLLKWFERFPQYKGRDFYITGESYAGHYIPQLAQAITRCNCWFDLDETYKLLNIFCDSQSFIHTSSQCDQMMDVAANELGNIDIYSIFTPSCTVNGNFSNKLLKRLNYDPCTLKHSRVYFNLREVQKALHVNPEVAPSKWETCSDVVNRNWKDSLGSELHIYRELISAGLRIWMFSGDTDTVIPVTSTRYSIAALKLPTISSWRAWYDDGQVGGWTQEYAGLTFVTVRGAGHEVPLHKPKLALVLIKAFLSGSPMPTLSEFSSS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00137 441 ProSitePatterns Serine carboxypeptidases, serine active site. 196 203 IPR018202 GO:0004185
Eupl10g00137 441 Gene3D alpha/beta hydrolase 47 271 IPR029058 -
Eupl10g00137 441 Pfam Serine carboxypeptidase 224 429 IPR001563 GO:0004185|GO:0006508
Eupl10g00137 441 Pfam Serine carboxypeptidase 56 215 IPR001563 GO:0004185|GO:0006508
Eupl10g00137 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Eupl10g00137 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 145 IPR001563 GO:0004185|GO:0006508
Eupl10g00137 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 156 IPR001563 GO:0004185|GO:0006508
Eupl10g00137 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 207 IPR001563 GO:0004185|GO:0006508
Eupl10g00137 441 Gene3D - 288 326 - -
Eupl10g00137 441 ProSitePatterns Serine carboxypeptidases, histidine active site. 399 416 IPR033124 GO:0004185
Eupl10g00137 441 SUPERFAMILY alpha/beta-Hydrolases 52 432 IPR029058 -
Eupl10g00137 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 223 416 IPR001563 GO:0004185|GO:0006508
Eupl10g00137 441 Gene3D - 336 429 - -
Eupl10g00137 441 FunFam Carboxypeptidase 335 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00137 Eupl-Chr10 12553112 12558517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00137 293 432 Calmodulin-binding Proteins AT2G22960 28.369 1.57e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00137 K16297 - nnu:104609183 650.588