Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00106 ATGGCGAAGATATCACAGCAAAACCAGAAGAACACAGCTGCAAACAACAATCCTGCAACAAAAGTGAAAAGAACAAGGAAGAGCGTCCCAAGAGACTCTCCTCCTCAACGTAGCTCAATCTTTCGAGGGGTCACAAGACATCGTTGGACCGGTCGATATGAAGCGCATTTGTGGGATAAGAATTGCTGGAATGAGTCCCAAAACAAGAAAGGAAGACAAGTCTATCTTGGTGCTTATGATAATGAAGAGGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTACTGGGGACAGGATACCATCCTCAATTTTCCGCCGTCGACGTACCAAGACGAGCTAAAAGAAATGGAGAATCAGTCCAAAGAAGAATATATTGGATCTTTAAGAAGGAAAAGTAGTGGGTTTTCTCGGGGAGTCTCGAAATACAGAGGCGTCGCAAGACATCATCACAATGGAAGATGGGAAGCTCGGATCGGACGAGTATTCGGCAACAAATACCTGTATCTTGGAACATACGCGACCCAAGAAGAAGCGGCGACGGCATACGACATGGCAGCCATCGAGTACCGTGGACTTAACGCCGTTACAAACTTCGACCTCAGCCGTTATATTAAATGGCTCCGACCCAATTCCAATAACCCGAACCCTAGTAACCCGAACCCTAACCCGAACCTTAATCCCACTCCAAGTCCAAGCCCTAATCACGAGCTCGAATTACACCGCCAGAGCTCCGGCCCCGCTGAAACCGCACTCGCTCAGCCACGGCCAGCCGGCGGCGCTACCGCCTCGTCGGCACTGGGACTTCTGCTTCAGTCGTCGAAGTTCAAAGAGATGCTCGAGAGAACATCAGCCGCCGACTTCCCATCGACGCCGCCTGAATCTGACCCACCACGGTGCAGCTTCCCTGACGACATACAAACCTACTTCGAGTGTCAGGATTCCGGTAGTTACGCGGAGGGAGACGATGTTATCTTCGGCGATCTAAACTCGTTCTCATCGCCGATCTTTCAGTGCGAGTTGGACGCCTGA 1032 0.5068 MAKISQQNQKNTAANNNPATKVKRTRKSVPRDSPPQRSSIFRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDNEEAAAHAYDLAALKYWGQDTILNFPPSTYQDELKEMENQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNSNNPNPSNPNPNPNLNPTPSPSPNHELELHRQSSGPAETALAQPRPAGGATASSALGLLLQSSKFKEMLERTSAADFPSTPPESDPPRCSFPDDIQTYFECQDSGSYAEGDDVIFGDLNSFSSPIFQCELDA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00106 343 FunFam AP2-like ethylene-responsive transcription factor 141 202 - -
Eupl10g00106 343 MobiDBLite consensus disorder prediction 212 262 - -
Eupl10g00106 343 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 SMART rav1_2 40 112 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 PRINTS Ethylene responsive element binding protein signature 182 202 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 ProSiteProfiles AP2/ERF domain profile. 40 106 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 SUPERFAMILY DNA-binding domain 141 202 IPR016177 GO:0003677
Eupl10g00106 343 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 CDD AP2 141 202 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 MobiDBLite consensus disorder prediction 1 43 - -
Eupl10g00106 343 FunFam AP2-like ethylene-responsive transcription factor 39 108 - -
Eupl10g00106 343 Gene3D AP2/ERF domain 141 202 IPR036955 GO:0003700|GO:0006355
Eupl10g00106 343 Gene3D AP2/ERF domain 40 107 IPR036955 GO:0003700|GO:0006355
Eupl10g00106 343 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 257 - -
Eupl10g00106 343 MobiDBLite consensus disorder prediction 1 23 - -
Eupl10g00106 343 MobiDBLite consensus disorder prediction 215 231 - -
Eupl10g00106 343 SUPERFAMILY DNA-binding domain 39 108 IPR016177 GO:0003677
Eupl10g00106 343 Pfam AP2 domain 141 192 IPR001471 GO:0003700|GO:0006355
Eupl10g00106 343 Pfam AP2 domain 41 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00106 Eupl-Chr10 11447994 11451971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00106 36 235 AP2-EREBP Transcription Factor Family AT5G57390 61.611 3.58e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl10g00106 AP2 6.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00106 K09285 - aew:130750008 528.865