Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00096 ATGGCGGATGAAGAAGAAAGAGCTCTGGAGAAGCAATTAGAACTTCAATTAGAAGAACAGAGAGAGTCGCTGACGGCTATAAACGAGGCCTTGGTTTCGGATCCAACGAATACGGAGCTTCTTACGGTTCATGAGGAGCTTGTTCTGGCGATCAGGGATGCAGAGGAAGGGCTTTTTCACCTAAAACGTTCACGGTTATTGCGAGAAACTGATTTGATTCTATCAATACAAGGTTCTGAATCTACTGCGGAGGATGTCAAGGTGGAGCCTCTTGATCCAACACATGTTGAAGCTGAACCATTGGAAGTGAAATGTTACTCAGTTGGATCAAAATGTAGATTCCGTCACACTGATGGACGTTGGTATAATGGTGAGATAGTTGGTTTGGAAGGTTCTCGTTCTGCAAGGATCTCCTTCCTTACACCCACATCTGAAAACATGTTGATCTGCAAGTTCTATCTACAGCAGCGATGTCGATTTGGTAGTAACTGCCGCTTGTCACATGGAGTTGATGTTCCCATATCTTCCCTGAAGAATTATATTCCAACAATATGGCAGCAGTCATTAGTGGGATCCAATATTTGGGCCGTCTCAGATACTAGTTCTGGCATCTGGAGGGAAGCAGAGCTCGAGTCATGGGATGACGCAACTAAACTGGGTCAGGTTGTCTTCCGAGACAATGGAAGCTCCACAAGGCTTGGGAGTGAGGCACTTTCATTGTCTGAATATGCTCAAATGACCGAGGAGGAAGAAGATGAATCAAGTTCGGAACAATCTGATTCCAGTGACTATGAAGAAGAGAGCTCTCAAGGTCTTGGATTTATGGAAGCCACAACACTGCAGCGGGGCATCCAGACTGATACTGCTGTGTTTGCAAAGTGGGAACATCACACCCGGGGCATAGCTTCCAAGATGATGGCCAACATGGGTTACCGTGAAGGGATGGGCTTAGGTGCATTGGGACAGGGAATTGTGGACCCTGTCTCTGTAAAAGTACTCCCACCAAAGCAATCGCTCGATCATGCACTTGAGTCTCATGAGAGTGAGGAGAACAAAGAAAGTCACAGGAAGAAACGCAGTAGGGGTGGTAAGAGGAAGCGTGATAAGAAGTACGCAGCTGCGGCACGGGCTGCGAAAGATGTAGAGTTGTTGGAACCAGATGTCTTCAGCTTCATCAATAATCAGCTTGCGATGCAAGGTGAAGCACAGAATGGGTGGACAAAGAAACAACAGAATAAGAGCTCAAGGGAAGCAAAGAAGGAAGACAGGCGGGCTTTGATTGCTTATGATGACGAAGTGAAGGAGTTGAGGATCCAGGTTGAGAAGCTGGAAGAAATGGTGAATCGGAACAGAAACGAAAAGGTGGTGTATGAAGCTTTTGTGAGGAAGTTGAACGAGACCCGAAAGGCTTTGGCAGATGCCGTGGCGACTCATGCATCTGCATCCAATGCAGTTGTCAGCAGGGAGAAAGAGAAGAGGTGGCTGAAGTTTTGA 1494 0.4679 MADEEERALEKQLELQLEEQRESLTAINEALVSDPTNTELLTVHEELVLAIRDAEEGLFHLKRSRLLRETDLILSIQGSESTAEDVKVEPLDPTHVEAEPLEVKCYSVGSKCRFRHTDGRWYNGEIVGLEGSRSARISFLTPTSENMLICKFYLQQRCRFGSNCRLSHGVDVPISSLKNYIPTIWQQSLVGSNIWAVSDTSSGIWREAELESWDDATKLGQVVFRDNGSSTRLGSEALSLSEYAQMTEEEEDESSSEQSDSSDYEEESSQGLGFMEATTLQRGIQTDTAVFAKWEHHTRGIASKMMANMGYREGMGLGALGQGIVDPVSVKVLPPKQSLDHALESHESEENKESHRKKRSRGGKRKRDKKYAAAARAAKDVELLEPDVFSFINNQLAMQGEAQNGWTKKQQNKSSREAKKEDRRALIAYDDEVKELRIQVEKLEEMVNRNRNEKVVYEAFVRKLNETRKALADAVATHASASNAVVSREKEKRWLKF* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00096 497 ProSiteProfiles Zinc finger C3H1-type profile. 144 171 IPR000571 GO:0046872
Eupl10g00096 497 Coils Coil 426 453 - -
Eupl10g00096 497 MobiDBLite consensus disorder prediction 341 356 - -
Eupl10g00096 497 MobiDBLite consensus disorder prediction 357 372 - -
Eupl10g00096 497 Pfam G-patch domain 298 340 IPR000467 GO:0003676
Eupl10g00096 497 Gene3D - 121 181 - -
Eupl10g00096 497 SMART c3hfinal6 144 170 IPR000571 GO:0046872
Eupl10g00096 497 MobiDBLite consensus disorder prediction 245 264 - -
Eupl10g00096 497 MobiDBLite consensus disorder prediction 402 422 - -
Eupl10g00096 497 MobiDBLite consensus disorder prediction 244 270 - -
Eupl10g00096 497 SUPERFAMILY CCCH zinc finger 145 169 IPR036855 GO:0046872
Eupl10g00096 497 MobiDBLite consensus disorder prediction 341 372 - -
Eupl10g00096 497 ProSiteProfiles G-patch domain profile. 298 344 IPR000467 GO:0003676
Eupl10g00096 497 SMART G-patch_5 296 342 IPR000467 GO:0003676
Eupl10g00096 497 Pfam CCCH-type zinc finger 149 169 IPR041367 -
Eupl10g00096 497 Coils Coil 1 30 - -
Eupl10g00096 497 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00096 Eupl-Chr10 11115349 11135528 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl10g00096 G-patch 7.4e-13 CL0449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00096 - - nnu:104608716 697.197