Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00088 ATGAACACCGAGCAGAAAGGTCTGCAACCTCCACTCAGTATGATCTGCGTTTCAGCGAAACAAGAGCCGCAGCATCAGTGCCGTAACCTGGCGCCGGGAAATCAAACGTCGTCGGATTTGCCGGCGAGAAAAACAACTTATTCTGCGATTGAAGCTCGGCCTCTGCAATCTCTACCTCCTTCGAGCACAAGAACGCTCGAGAACGGTGGCGAGGGAGAAGAAGAGAAGAAGCGAGAGAAGGAGCACAAGAGGAGGTCGAAGAACTGGACACGAATCGAGACGTTGAAGCTAATAAGGTTTAGATCGGAGATGGAGCCAAGGTTTTTGAGGAGCGGTCGGAAGTCGGAGCTCTGGGACGAGATTTCGGAAGCTCTGAGAAGCGAAGGGATCTGCAGAGACGCGCAGCAGTGCAGAGATAAATGGGAGAAGCTTACGGCTGGGTACAAAGAAGTTCGAGACGGAGTTCGAGAGAAGGAAGACTATCCGTTCTACGATGATCTCGATCCTCTTCTCTCAGGTAAAGTTCAAAGAAGAGAAACTCAAGCTCAAACTCATCGGATCGACTTTCATAGAGAGGTCGAGATGGAGATCGGAGGAGATAGCGCGTTCATCCGATCGGAAGGAGAAGACACCGAAGACGGAACCGATTTTCCGGCGAGAAAGAGGCGAAAATCGGTTAACGTCGGAGGCGACGATACGATGGAGGCTTTGAAGGATCTATTAGAGAGCTTAATATCGAGACAACACAGATTCTTCGTAGATCTTCTCGAATCGATAGAACGAAGAGAGAAAATCCGAGAGAAGATCAGGCAAGAGCGAGAGGAGAAATGGCGAGAAGAAGATCGAGCGGAGAGACTCGTCTTCCAGAACGCCATGATTCTGCTCACTAAGAAGCTGGTTAACGAGGGCGTCAGATGCAGCTCCGACGCTTCATGCTATCCTACACCGGGGGTGGGAACCACTCCCCCACCGGAAACAGCCGTCGCCGGTGGTGGTGGAGGGATGAAGAAACGGTCGAAGAACTGGAAGAGAGCGGAGGTTCTGACACTGATAAAGCTGAGGACGGAGATGGAAGGTAGGTTCGCCAAGTCGACGAGGAGGGCGGTGCTGTGGGACGAGGTAGCGGAGCTATTGTGTGCCGAGGGAGTGAAGAGGGACGGGAAGCAATGCAGAGAGAAGTGGGACAAGCTGATGGCGGAGTACAAAGAGGTCTCAGACGGGAAGAGAGACCCTGGAGACAGTCCTTACTTCGCAGATATCCTCACCATCACACGTGGCTCTTCGTCCTCCTTCGAAGCTCAACCCTCCACTACTGTGGTTGAATAG 1326 0.5241 MNTEQKGLQPPLSMICVSAKQEPQHQCRNLAPGNQTSSDLPARKTTYSAIEARPLQSLPPSSTRTLENGGEGEEEKKREKEHKRRSKNWTRIETLKLIRFRSEMEPRFLRSGRKSELWDEISEALRSEGICRDAQQCRDKWEKLTAGYKEVRDGVREKEDYPFYDDLDPLLSGKVQRRETQAQTHRIDFHREVEMEIGGDSAFIRSEGEDTEDGTDFPARKRRKSVNVGGDDTMEALKDLLESLISRQHRFFVDLLESIERREKIREKIRQEREEKWREEDRAERLVFQNAMILLTKKLVNEGVRCSSDASCYPTPGVGTTPPPETAVAGGGGGMKKRSKNWKRAEVLTLIKLRTEMEGRFAKSTRRAVLWDEVAELLCAEGVKRDGKQCREKWDKLMAEYKEVSDGKRDPGDSPYFADILTITRGSSSSFEAQPSTTVVE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00088 441 PANTHER FI21293P1 63 426 - -
Eupl10g00088 441 MobiDBLite consensus disorder prediction 316 338 - -
Eupl10g00088 441 MobiDBLite consensus disorder prediction 19 86 - -
Eupl10g00088 441 MobiDBLite consensus disorder prediction 68 86 - -
Eupl10g00088 441 FunFam Trihelix transcription factor GT-2 342 403 - -
Eupl10g00088 441 ProSiteProfiles Myb-like domain profile. 81 145 IPR001005 -
Eupl10g00088 441 SMART sant 338 400 IPR001005 -
Eupl10g00088 441 SMART sant 85 147 IPR001005 -
Eupl10g00088 441 ProSiteProfiles Myb-like domain profile. 334 398 IPR001005 -
Eupl10g00088 441 Pfam Myb/SANT-like DNA-binding domain 340 419 IPR044822 -
Eupl10g00088 441 Pfam Myb/SANT-like DNA-binding domain 87 169 IPR044822 -
Eupl10g00088 441 MobiDBLite consensus disorder prediction 19 67 - -
Eupl10g00088 441 Coils Coil 255 282 - -
Eupl10g00088 441 CDD GT1 87 152 - -
Eupl10g00088 441 CDD GT1 340 404 - -
Eupl10g00088 441 Gene3D - 342 403 - -
Eupl10g00088 441 Gene3D - 89 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00088 Eupl-Chr10 10775816 10781611 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00088 342 436 Trihelix Transcription Factor Family AT5G03680 33.673 1.70e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl10g00088 Myb_DNA-bind_4 5.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00088 - - nnu:104605464 510.76