Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00087 ATGTTAAGATATTTCATTCATAGTCGGTATCCTCAGATGTCAGAGGGGGCAATTGCAAAGGCTTGCGCAGTTTGCCGAGGAAATTGCAATTGCAAAGCATGCTTGCGTAGAATTGGAACATTTAAGGAGTTGAAGAACTCAGAGATGAAGATAAAGGAAGGTGAAAGGGTTAACTACTCTAAATATTTGGTACATGTACGTCTTCCAATCCTGAAACAAATTGATCAAGAACAAATGACGGAAAAGGAGATGGAGGCTAAGATTCAAGGTACCCCACATAACTTTGGGTATCAATCATCATTGCTAGTGTTGTTAGATAGACTTTGCAACAACTGCCAAACTTCCATTGTTGACTTCCACAGAAGCTGTCAAAACTGTTCGTACGATCTTTGCCTTAATTGTTGCCGGGAGATTCATGAGGGCTGCCAACTGGGAGGCAGGGAGGAAGTAGTCGTGCAATATGTCGACAGAGGAAAAACTTATCTGGATGGTGAAGACTGGCCTTCCAGGTCTTCGTCGAAACAAGCTTTGGAATTCTGTTTTGAAACGAGCTCTAAGAATCATGCCAGGCCAATATCTGAGTGGCAAGTGAAGAAAAATGGTAGCATACCTTGTCCACCTAAGGAAATGGGTGGCTGCGGCTGTGGCCTTCTAGAGCTGAAGTGTATGTTCCCAGAAAATTGGGTCTCGAAATTGAAAAAGAGAGCAGAAGAAATAGCCGATAAACACAGACTTCTGGTTGTTCCTGGAACTAATACACAGTGGTGCTCCTGTTTCAACTCGGTTGATATCCAACATGGGGAAGTGGGGCACTTCCAGAAGCATTGGGTCAAAGGTGAGCCAGTGATCATCCGCAATGTGCTTGAACATACATCTGGCTTGCTCTGGGAGCAGATGGTTATGTGGCGTGTGTTGCGTGAGAAAACAAACTCCAGGTTCTCAAAGGGTTCCTTGCATTTGGGAGTGAAGGTTATTGATTGCCTGGATTGGTGTGAGGTTGAGATTAATATTCACCAATTTTTCAAAGGGTATTCGGTCGGTCGGACACACGATAACTTGTGGCCTGAGATGCTCAAACTGAAAGATTGGCCCCCATCTAATTTCTTTGAGGAGCGCTTGCCACGCCATGGTGCTGAGTTCATCAGTGCTTTGCCATTTCAGGAGTACACACATCCCAACTATGGACTTCTTAATCTTGCTGCAAAGCTACCAAAGCAAACCCTGAAGCCGGACCTGGGGCCAAAGACATATATTGCTTATGGGACTGCTAAAGAGCTAGGCTGTGGGGACTCTGTAACCAAGCTTCATTGTGACATGTCTGATGTGGTGAATGTTTTGACGCATACTGCAGAAGTGTTCCTTACCCCTGCACAGCTTGCTAACATAGAAAAGTTGAAAAAGAGTCATTATGCCCAAGATCAAATGGAACTATTTGGTGCTTTTCAGGAGTGCCAGAAGGTTGACGAAAAGCACATGTCACCATGCATAGGGAAATGCATACCAGAACCAGTTGGTACTGAGTCACTGTCTGCAGCGGAAGCTGTTGTCTCTTGTATGGTTTCTGCAATGGATAGGCCCCCTATTAGTGGTTTTGATGCGAAGGAAAAAGAAATGGGTATATTTGATGTTAGACCTAAATGTAAAATGCTAGATGTTGGCGTTCAGGAGGAAGGCGATTACCATCTTGTGGATATCAAAGCTGAAATAGACGAACATGCTGGAATTGAGGAAAAGGAAGAAGACATGGGTGGATTTGATGTTATACCTAAAGGTAACGTGCTAGATGTTAGAGTTGAGAAGGAAGGCACTTCTCAGGTTGTGGATTCTAAAGCTGACATAAATGAAGAACTTGTGGGAGCAGAAGAAATGGAAAAGGAAATGAGTATAGTTGATGTTAGACCTAAAGGTAACATACTAGATGTTGGATTTCAGGTGGAAGGTGACGTTGGTGGGTTTGATGTTAGACCTAAAGATGATGTGCAAGATGATGCTGGATTTCAGGAGGGAGACACTTCTCATGTTGTAAACATCAATGATGAAATAGAAGAGGGACTTACTGGAAAAAATGGTTTTTTTGGTTCCCCACCAGAAGTGGGAATTAAGGATAATGCCATGATAGAAACTGGTACCCATGGAAATATACCTGAAGCCTCTGCAAAGAGTGAAAAGAGTAAGAAGATGGATGGAAATAGAAAGAAGAAGAGGGGCAGACCTGCAGTTTCTGCCAACAAGTTGGAGAGGACCGTGCCAGCGAAGGGCGGGGCTCTTTGGGACATTTTCCGCAGACAAGATGTTCCTAAGCTTCAGGAATATCTCAGAAAACACTCCAGGGAATTCAGACACATCCACTGTTCTCCAGTGGAGCAGGTTGCTCACCCCATTCATGACCAGACTTTCTACTTGACTTCAGAGCATAAAAGGAAGCTCAAGGAGGAATTTGGAATTGAACCATGGACATTTGTGCAAAAACTTGGAGAGGCAGTCTTTATTCCAGCTGGATGTCCTCATCAAGTTAGAAATCTCAAGTCATGTATAAAGGTCGCTCTTGAGTTTGTCTCACCCGAAAATGTCCATCAGTGCATCTGTTTGAGTGAGGAATTTCGTGTACTTCCCCATAATCACAGGGCAAAGGAAGACAAACTGGAGGTAAAGAAAATGACGCTCCACACAATCAGCCAAGCTATTAAGGATTTGGAGCTGCTTACCAAGTCATGCCGCAATGGAGGGAAAAGAAAAACTCGGGGAGCCACCTGA 2754 0.4401 MLRYFIHSRYPQMSEGAIAKACAVCRGNCNCKACLRRIGTFKELKNSEMKIKEGERVNYSKYLVHVRLPILKQIDQEQMTEKEMEAKIQGTPHNFGYQSSLLVLLDRLCNNCQTSIVDFHRSCQNCSYDLCLNCCREIHEGCQLGGREEVVVQYVDRGKTYLDGEDWPSRSSSKQALEFCFETSSKNHARPISEWQVKKNGSIPCPPKEMGGCGCGLLELKCMFPENWVSKLKKRAEEIADKHRLLVVPGTNTQWCSCFNSVDIQHGEVGHFQKHWVKGEPVIIRNVLEHTSGLLWEQMVMWRVLREKTNSRFSKGSLHLGVKVIDCLDWCEVEINIHQFFKGYSVGRTHDNLWPEMLKLKDWPPSNFFEERLPRHGAEFISALPFQEYTHPNYGLLNLAAKLPKQTLKPDLGPKTYIAYGTAKELGCGDSVTKLHCDMSDVVNVLTHTAEVFLTPAQLANIEKLKKSHYAQDQMELFGAFQECQKVDEKHMSPCIGKCIPEPVGTESLSAAEAVVSCMVSAMDRPPISGFDAKEKEMGIFDVRPKCKMLDVGVQEEGDYHLVDIKAEIDEHAGIEEKEEDMGGFDVIPKGNVLDVRVEKEGTSQVVDSKADINEELVGAEEMEKEMSIVDVRPKGNILDVGFQVEGDVGGFDVRPKDDVQDDAGFQEGDTSHVVNINDEIEEGLTGKNGFFGSPPEVGIKDNAMIETGTHGNIPEASAKSEKSKKMDGNRKKKRGRPAVSANKLERTVPAKGGALWDIFRRQDVPKLQEYLRKHSREFRHIHCSPVEQVAHPIHDQTFYLTSEHKRKLKEEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCIKVALEFVSPENVHQCICLSEEFRVLPHNHRAKEDKLEVKKMTLHTISQAIKDLELLTKSCRNGGKRKTRGAT* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00087 917 CDD cupin_RmlC-like 792 852 - -
Eupl10g00087 917 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 257 903 IPR045109 GO:0032454|GO:0033169
Eupl10g00087 917 MobiDBLite consensus disorder prediction 708 741 - -
Eupl10g00087 917 SUPERFAMILY Clavaminate synthase-like 271 899 - -
Eupl10g00087 917 Gene3D Cupin 702 877 - -
Eupl10g00087 917 Gene3D Cupin 257 500 - -
Eupl10g00087 917 ProSiteProfiles JmjC domain profile. 392 868 IPR003347 -
Eupl10g00087 917 SMART cupin_9 373 868 IPR003347 -
Eupl10g00087 917 FunFam Transcription factor jumonji (JmjC) domain-containing protein 700 877 - -
Eupl10g00087 917 Pfam JmjC domain, hydroxylase 754 851 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00087 Eupl-Chr10 10630725 10646364 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl10g00087 JmjC 4.9e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00087 K15601 - vvi:100244450 873.233