Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00073 ATGAAGAACACAACTTATCCTCATTTTTCTCTACTTTTCTTTCTTATCTCTTTGCTTAGGCTGTCCGGTGAGAGGGCTGACGGCCAAAATGCGACATCTACCGTCGATGTTGGGGTGATTCTTGATTTGGATACGTGGGTGGGGAAGACGAGCCAAAGTTGCATTTCGATGGCCCTCTCCGATTTCTACTCTACTCACAAGAACTACACAAAAAGGATGGTCCTTCACACCAGGGACTCCAAGAAAAACAGTGTGGATGCTGCATCAGCAGCTATAGACCTACTGAAAAATGTTCAAGTGCAAGCCATACTTGGGCCTCAAAAATCTGTTCAGGCAGAATTTGTAGTGGATATTGGAAACAAAACTCAGGTACCCATCATATCATTTTCGGCAACGAGCCCTTCCCTCTCATTTGCCGAAACTCCTTATTTCATCCGAGCAGCGTTGAACGACTCCTCTCAGGTGAAAGCCATCGCCGCAATTGTTCAAGCCTTCAGATGGAGAGAAGTTATCCCCATCTATGAAGGCAGCGATTTTGGAAAAGGCATCTTACCATATCTAATCGATACAATCCAAGAGATTAATGCCCGTGTCCCCTATAGGAGTGTTGTTTCTTCTTCAGCCACTGATGATCAGATCCTCGGAGAGCTTTATAAATTGATGACGATGCACACGAGGGTTTTCGTAGTGCACATGTCATCATCTCTTGGCTCCCGCCTTTTTTTGAAAGCGAAAGAAATCGGAATGATGAATAAAGGGTATGCATGGATCATCACAGATGGGCTTACAAATCTCTTAGGTTCCATGGATTCCTCCATCATCAACTCGATGCAAGGAGTACTAGGTGTAAAGCCTTATGTTCCAAGAACGAAAGCACTTGACAATTTCAAAAGTAGATGGAAAAGAAAATTTCTACTTGAGAATCCAGACATCGATAGAGCTGAGCTAAGTGTTATTGGACTATGGGCATATGATAGCATTTGGGCACTAGCAATGGCAGTGGAGAAAGTTTCTGTTGTCAGTCGTCGATTCAAGGAGCCGAACAACGGAGACAACTCGACGGACCTGGCAACCCTTGGAATGTCTCATATGGGTCCAAAGCTCCTTGAAGCGATCTTGGAGACTAGATTTGAAGGATTGAGTGGGGAATTCTGGCTTTTGGACGGGCAATTGCAATCGTCAACATTCCAAATAGTCAATGTGATTGGAAAAGGCGATAGAGAGATTGGGTTCTGGACTCCAGCCCATGGAATTTCCAAGAAATTGGACAAGGTTGATAAGAAATTGTATTCAGTCTCTATGGATGGTCTCCGAGCCATAGTCTGGCCAGGAGAATCGACGGTAGTGCCGAAGGGTTGGGAGTTGCCAACAAATGAGAAGAAGTTGAAGATTGGAGTTCCAGTGAAAGATGGTTTCACTGAATTTGTGAAGGTGGAACGGGATCGTCACACCAATGCTATAATGGTCACTGGATTTTGCATAGATGTCTTCAAGACTGTCATGGAATCATTGCCATACGCCGTTCCCTATGAGTTTGTTCCCTTTGAGAAAACTGATGGCACGAGTGCAGGGAATTATAACAGTCTAGTCTACCAGATTTATCTTCAGAAATATGATGCTGTAGTTGGAGATACGGCAATTCTAGCCAACCGATCTTTGTATGTAGATTTCACATTGCCTTTTACGGAGTCTGGGGTGGCGATGGTAGTGCCAATAAAGGATGATGAGAGGAAGAATCCATGGATTTTCTTAAAGCCTTTGACTATGGACCTTTGGCTAACGACTGGAGTGTTTTTCATCTTCACCGGCTTCGTGGTTTGGGTTATTGAGCACCCTATAAACATTGATTTCAGAGGCTCACCTGCCCAACAAATCGGCATGATATTTTGGTTCTCCTTCTCAACTCTTGTGTTTGCCCATAAGGAAAAGGTGATAAGCAACTTGTCTAGGTTTGTGGTGATTGTATGGATATTTGTTGTCCTCATTCTGACATCAAGTTATACGGCGAATTTAACATCAATGTTAACAGTAGAGAAGCTCCAACCAACCGTCACGGACATCAAAGATCTCATTAAGAATGGAGACTATGTAGGCTACCAAAGGGGTTCATTCGTTACAGGACTTATGGAGAGCTTGAACTTCGACCAGTCCAAGCTTAGGATGTATAACACTCCAGAAGAGTATAACGAGGCCATGTCAAGAGGGAGTCGAGATGGTGGTGTTGCTGTCATTATTGATGAGATTCCTTACATCAAGCTCTTCCTTGCGAAGTATTGCACCAAATACATGATGGTTGGACCGACCTACAAGACTGCTGGCTTTGGCTTTGCCTTCCCCAAGGGCTCTCCTCTAGTACCTGACATTTCGAGGGTGGTCTTAAATATAACTGAGGGAGAGAAGATGGTGGCGATCGAGCAGGCATGGTTTGGGAATCAGACTTATTGTATAGAGCAAGGAGGGACCAATGTCACCTCTAACAGCCTCACTCTCGATAGCTTTAGGGGCCTTTTCCTTATTGCTGGAGTCACTTTAGCTTGTGCTCTTTTCATATTCTTGTTTACATTCCTTTATGAGCATAGGGACATTTTATCTTCTGAAGATTCTATTCGACAAAAGCTCGTATCTATGGCCAAACACTTTGATCAGCTGATAGACCCCTCTTCTCATGCATCCAATAAGACAAAACCCTCATGTAAAGGGACAACAAAAGAGGTAGGAAATGTTGAGCATCCAAATGATACAAAGACTCCACAAAGTCCAGCAATAAGCATATCTCTCCATGTCGATGCAATCTTCCCCCAAGAAGATGGTTTCTCTACAGAAGCTAGCATGCCAACTCGAGACCCACTAAATGTAATAGAGATAACTCAAGTAAATTGA 2880 0.4368 MKNTTYPHFSLLFFLISLLRLSGERADGQNATSTVDVGVILDLDTWVGKTSQSCISMALSDFYSTHKNYTKRMVLHTRDSKKNSVDAASAAIDLLKNVQVQAILGPQKSVQAEFVVDIGNKTQVPIISFSATSPSLSFAETPYFIRAALNDSSQVKAIAAIVQAFRWREVIPIYEGSDFGKGILPYLIDTIQEINARVPYRSVVSSSATDDQILGELYKLMTMHTRVFVVHMSSSLGSRLFLKAKEIGMMNKGYAWIITDGLTNLLGSMDSSIINSMQGVLGVKPYVPRTKALDNFKSRWKRKFLLENPDIDRAELSVIGLWAYDSIWALAMAVEKVSVVSRRFKEPNNGDNSTDLATLGMSHMGPKLLEAILETRFEGLSGEFWLLDGQLQSSTFQIVNVIGKGDREIGFWTPAHGISKKLDKVDKKLYSVSMDGLRAIVWPGESTVVPKGWELPTNEKKLKIGVPVKDGFTEFVKVERDRHTNAIMVTGFCIDVFKTVMESLPYAVPYEFVPFEKTDGTSAGNYNSLVYQIYLQKYDAVVGDTAILANRSLYVDFTLPFTESGVAMVVPIKDDERKNPWIFLKPLTMDLWLTTGVFFIFTGFVVWVIEHPINIDFRGSPAQQIGMIFWFSFSTLVFAHKEKVISNLSRFVVIVWIFVVLILTSSYTANLTSMLTVEKLQPTVTDIKDLIKNGDYVGYQRGSFVTGLMESLNFDQSKLRMYNTPEEYNEAMSRGSRDGGVAVIIDEIPYIKLFLAKYCTKYMMVGPTYKTAGFGFAFPKGSPLVPDISRVVLNITEGEKMVAIEQAWFGNQTYCIEQGGTNVTSNSLTLDSFRGLFLIAGVTLACALFIFLFTFLYEHRDILSSEDSIRQKLVSMAKHFDQLIDPSSHASNKTKPSCKGTTKEVGNVEHPNDTKTPQSPAISISLHVDAIFPQEDGFSTEASMPTRDPLNVIEITQVN* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00073 959 Gene3D - 461 579 - -
Eupl10g00073 959 PIRSF IGluLR_plant 4 937 IPR017103 -
Eupl10g00073 959 Gene3D - 358 460 - -
Eupl10g00073 959 SUPERFAMILY Periplasmic binding protein-like II 437 811 - -
Eupl10g00073 959 Gene3D - 755 817 - -
Eupl10g00073 959 Pfam Ligand-gated ion channel 812 843 IPR001320 GO:0015276|GO:0016020
Eupl10g00073 959 SUPERFAMILY Periplasmic binding protein-like I 33 453 IPR028082 -
Eupl10g00073 959 FunFam Glutamate receptor 2.7 717 817 - -
Eupl10g00073 959 CDD PBP1_GABAb_receptor_plant 36 419 IPR044440 -
Eupl10g00073 959 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 887 IPR015683 -
Eupl10g00073 959 FunFam Glutamate receptor 156 313 - -
Eupl10g00073 959 FunFam Glutamate receptor 325 460 - -
Eupl10g00073 959 Pfam Bacterial extracellular solute-binding proteins, family 3 489 811 IPR001638 -
Eupl10g00073 959 Gene3D - 152 316 - -
Eupl10g00073 959 CDD GluR_Plant 460 809 - -
Eupl10g00073 959 FunFam Glutamate receptor 461 580 - -
Eupl10g00073 959 MobiDBLite consensus disorder prediction 886 901 - -
Eupl10g00073 959 FunFam Glutamate receptor 580 710 - -
Eupl10g00073 959 Pfam Receptor family ligand binding region 52 402 IPR001828 -
Eupl10g00073 959 MobiDBLite consensus disorder prediction 886 919 - -
Eupl10g00073 959 Gene3D - 580 721 - -
Eupl10g00073 959 SMART GluR_14 461 811 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00073 Eupl-Chr10 9717132 9735361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00073 3 920 Ion Channels AT2G29120 50.108 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00073 K05387 - nnu:104599081 1246.49