Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00060 ATGAGGAACACAACTTATCCTCATTTTTCTCTACTTTTCTTTCTTCTCTCTTTGCTGATGAGTCTGTCCGGTAAGAGGGCAGACGCCCAACATGCGACATCTACCGTTGATGTTGGGGTGATTCTTGATTTGGGTACGTGGGTGGGTAAGAGTAGCCAAAGCTGCATTTCGATGGCCCTCTCAGATTTCTACTCGTCTCACAACAACTACACAAAAAGGCTGGTCCTTCACACCAGGGACTCCAAGAAAGACAGTGTGGATGCTGCATCAGCAGCTATAGACCTGCTGAAAAATGTTCAAGTGCAAGCCATACTTGGGCCTCAAAAATCTGCTCAGGCAGAATTTGTAGTGGATATTGGAAATAAAACTCAGGTACCCATCATATCGTTCTCGGCAACCAGTCCTTCCCTATCATTTTCCGAAACTCCTTATTTCATCCGAGCAGCCTTGAACGACTCCTCTCAGGTGAGAGCCATCGCCGCAATTGTTCAATCCTTCGGATGGAGGGAAGTTGTCCCCATCTATGAAAACACTGAATATGGAAAAGGCATCATACCGTATCTAATCGATGCAGTCCAAGAGATTAATGCCCATGTCCCCTACAGGAGTGTTGTTTCTTCTTCAGCCACTGATGATCAGATCCTCAGAGAGCTCTATAAATTGATGACCATGCAGACGAGGGTGTTCGTAGTCCACATGTCATCATCTCTTGGTTCCCGTCTTTTTTTGAAAGCGAAAGAAGCCGGAATGATGACTAAAGGGTATGCCTGGATCATCACAGATGGGCTTACAAATCTCTTAGGTTCCATGGATTCATCAGTCATCGACTCGATGCAAGGAGTACTAGGTGTAAAGCCTTATGTTCCAAGAACGAAAGCGCTCGACAATTTCAAAAGTAGATGGAAAAGAAAGTTTCTACTTGAGAATCCAGACATCGATAGAGCTGAGCTAAGTGTTATTGGATTATGGGCATATGATAGCATTTGGGCACTAGCAATGGCAGTGGAGAAAGTTTCTATTGTCGATCGTCGATTCAAGAAGCCAAACAATGGAGACAACTCGTCGGACCTGGCAACCCTGGGAATGTCTCATATGGGTCCAAAGCTCCTTGAAGCGATCTTAGAGACTAGATTTAAAGGATTGAGTGGGGAATTCTGGCTCCTGGGCGGGCAATTGCAGTCGTCAACATTCCAAATAGTTAATGTGATTGGAAAAGGGGATAGAGAGATTGGGTTCTGGACTCCAGCCCATGGGATTTCCAAGAAATTGGACTCGGCTGATACAAAAATTTATTCAACCTCCATGGATGAACTCCGAGCCATCGTCTGGCCAGGAGAATCGACGGTAGTGCCGAAGGGTTGGGAGATGCCAACGAATGAGAAGAAGTTGAAGATTGGAGTTCCAGTGAAAGATGGTTTCAGTGAATTTGTGAATGTGGAACGGGATCCCCGCACCAATGCTACAACAGTCACTGGCTTTTGCATAGATGTCTTCAAGACTGTCATGGAATCATTGCCATACGCCGTTCCCTATGAGTTTGTTCCCTTTGAGAAAGCCGATGGCACGAGTGCAGGGAATTATAACAGTCTAATCTACCAGATCTATCTTCAGAAATATGATGCAGTAGTTGGAGATACAACAATTCTAGCCAATCGATCTAATTACGTAGATTTTACGTTGCCTTTTACGGAGTCTGGGGTGTCGATGGTAGTGCCAATCAAGGGTGATGACAGGAAGAATACTTGGATTTTCTTAAAGCCTTTGACTATGGACCTTTGGCTAACGACTGGAGTGTTTTTCATCTTCACCGGCTTCGTGGTGTGGGTTATTGAGCACCGTATAAACATTGATTTCAGAGGCTCCGTTGTCCAACAAATCGGCATGATCTTTTGGTTCTCCTTCTCAACTCTTGTGTTTGCCCATAAGGAAAAGGTGATAAGCAACTTGTCCAGGTTTGTGGTGATTATATGGATTTTTGTTGTCCTCATTCTGACATCAAGTTATACGGCGAACTTAACATCAATGTTAACAGTAGAAAAGCTCCAACCAACCATCACGGACATCAAAGATCTCATTAAGAATGGAGACTATGTAGGCTACCAAAGGGGTTCATTCGTTACGGGGCTTATGGAGAGCTTGAACTTCGACCAGTCCAAGCTTAGGATATATAATACTCTAGAAGAGTACGACGAGGCCCTATCAAGAGGGAGTCGAGATGGGGGCGTTGCTGGCATTATTGATGAGATACCTTACATCAAACTCTTTCTTGCAAAGTATTGCACCAAATATACGATGGTTGGACCCACCTACAAGACTGCTGGCTTCGGCTTTGCTTTCCCCAAGGGCTCTCCTATAGTACCTGACATTTCAAGGGCAGTCTTAAATATAACTGAGGGTGACAAGATGGTGGCAATTGAGCAGGCATGGTTTGGGCATCGTACTTATTGTTTGGAGCAAGGAGGGAGCACTATCACCTCTAACAGCCTCACTCTCGATAGCTTCAGGGGCCTTTTCTTCATTGCTGGAATCGCTTCAGCTTCTTCTCTTTTCATATTCTTGTTTATATTCCTTTATGAGAATACGGACATTTTATCTTCTAAAGACTCTATTCGACAAAAGCTCGTATCTATGGCCAAACGCTTCGATGAGCTGATAGAACCCTCTTCTGATGCATCCAAAAAGATAGAACCCTCCTCTAAAGGGACAACAGAAGAGGTAAGAAGTGATGACGCTCCAAATGTTACAGACACTCCACAAAGTCCGGCTGTAAGCTTATCTCACAATGTGGATGCAATATTCTCTCAAGATGAAGGTTTCTCTACAGAAGCTAGCACGCCAACTCGAGATCCACCAGCTGTAATAGAGATAACTCGAGTAAATTGA 2883 0.4436 MRNTTYPHFSLLFFLLSLLMSLSGKRADAQHATSTVDVGVILDLGTWVGKSSQSCISMALSDFYSSHNNYTKRLVLHTRDSKKDSVDAASAAIDLLKNVQVQAILGPQKSAQAEFVVDIGNKTQVPIISFSATSPSLSFSETPYFIRAALNDSSQVRAIAAIVQSFGWREVVPIYENTEYGKGIIPYLIDAVQEINAHVPYRSVVSSSATDDQILRELYKLMTMQTRVFVVHMSSSLGSRLFLKAKEAGMMTKGYAWIITDGLTNLLGSMDSSVIDSMQGVLGVKPYVPRTKALDNFKSRWKRKFLLENPDIDRAELSVIGLWAYDSIWALAMAVEKVSIVDRRFKKPNNGDNSSDLATLGMSHMGPKLLEAILETRFKGLSGEFWLLGGQLQSSTFQIVNVIGKGDREIGFWTPAHGISKKLDSADTKIYSTSMDELRAIVWPGESTVVPKGWEMPTNEKKLKIGVPVKDGFSEFVNVERDPRTNATTVTGFCIDVFKTVMESLPYAVPYEFVPFEKADGTSAGNYNSLIYQIYLQKYDAVVGDTTILANRSNYVDFTLPFTESGVSMVVPIKGDDRKNTWIFLKPLTMDLWLTTGVFFIFTGFVVWVIEHRINIDFRGSVVQQIGMIFWFSFSTLVFAHKEKVISNLSRFVVIIWIFVVLILTSSYTANLTSMLTVEKLQPTITDIKDLIKNGDYVGYQRGSFVTGLMESLNFDQSKLRIYNTLEEYDEALSRGSRDGGVAGIIDEIPYIKLFLAKYCTKYTMVGPTYKTAGFGFAFPKGSPIVPDISRAVLNITEGDKMVAIEQAWFGHRTYCLEQGGSTITSNSLTLDSFRGLFFIAGIASASSLFIFLFIFLYENTDILSSKDSIRQKLVSMAKRFDELIEPSSDASKKIEPSSKGTTEEVRSDDAPNVTDTPQSPAVSLSHNVDAIFSQDEGFSTEASTPTRDPPAVIEITRVN* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00060 960 FunFam Glutamate receptor 326 461 - -
Eupl10g00060 960 MobiDBLite consensus disorder prediction 912 947 - -
Eupl10g00060 960 Gene3D - 153 317 - -
Eupl10g00060 960 Pfam Receptor family ligand binding region 53 403 IPR001828 -
Eupl10g00060 960 FunFam Glutamate receptor 2.7 718 818 - -
Eupl10g00060 960 FunFam Glutamate receptor 581 711 - -
Eupl10g00060 960 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 884 IPR015683 -
Eupl10g00060 960 CDD PBP1_GABAb_receptor_plant 37 423 IPR044440 -
Eupl10g00060 960 MobiDBLite consensus disorder prediction 897 911 - -
Eupl10g00060 960 SMART GluR_14 462 812 IPR001320 GO:0015276|GO:0016020
Eupl10g00060 960 Pfam Ligand-gated ion channel 813 844 IPR001320 GO:0015276|GO:0016020
Eupl10g00060 960 Gene3D - 360 461 - -
Eupl10g00060 960 FunFam Glutamate receptor 157 314 - -
Eupl10g00060 960 Gene3D - 582 721 - -
Eupl10g00060 960 MobiDBLite consensus disorder prediction 888 960 - -
Eupl10g00060 960 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 109 137 - -
Eupl10g00060 960 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 324 336 - -
Eupl10g00060 960 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 49 65 - -
Eupl10g00060 960 SUPERFAMILY Periplasmic binding protein-like II 439 812 - -
Eupl10g00060 960 Gene3D - 462 581 - -
Eupl10g00060 960 Gene3D - 757 818 - -
Eupl10g00060 960 CDD GluR_Plant 461 810 - -
Eupl10g00060 960 PIRSF IGluLR_plant 5 947 IPR017103 -
Eupl10g00060 960 FunFam Glutamate receptor 462 581 - -
Eupl10g00060 960 Pfam Bacterial extracellular solute-binding proteins, family 3 487 812 IPR001638 -
Eupl10g00060 960 SUPERFAMILY Periplasmic binding protein-like I 32 454 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00060 Eupl-Chr10 8025214 8076257 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00060 3 956 Ion Channels AT2G29120 48.803 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00060 K05387 - nnu:104599081 1226.08