Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00055 ATGATTATCTCCATGGACTTAAATGCTTCGCCATTACCTGAAGAAGATGAAGAAGCGATCTTTGAAGGGCATGTTGAAGAAGAAACTGCAGTGGAAGAGCATATCGAGACTGCAGTAGAAACACTTCGCAGAGAGCGAGAAGAAAGACGTCGGCGTTTGAAAAGAGAATTCTCAGATGAGGGGCCAAAGCGGGTTGTGCAGCCACCAAAGAAAGATACAGTGATTCAAATTAAAAACTCTAGATATTATGACAGAAACAAGCTCCCCCCTGGTTGGTTGGATTGCCCTGCATATGGTCAAGTTGTAGGTTACATAATCCCTTCCAAAGTTCCTCTTGGTGAATCTTTCAATGACTTCGTTGTTCCTGGGAAAAGATACTCTTTGAGACAAGTGATTCATCAACAAAGAGTGTTAGGAAGGGAACTCGGTTTAGTGATTGATCTGACAAACACTACTCGCTACTATCAACCGTCAGATTGGAAGAAACAAGGTATTAAGCATGTTAAGATTGCATGCAGGGGAAGGGATTCTGTACCAGATAATGAATCTGTAAATAACTTTGTCTATGAGGTCTTGCAGTTCTTCTCCCGCCAGAAACACTCAAAGAAGTACATTCTTGTCCATTGTACTCATGGGCATAATCGCACGGGTTATATGATTGTTCATTTTCTTATGCGGTCACAATCAATTTCTGTCACCGAGGCACTACAAATATTTGCTAATGCACGCCCTCCCGGAATCTATAAACAAGACTATATTGATGCATTATACACGTTTTATCATGAAAGAAAGCCTGAAACAATAATTTACCCTCCAACCCCCGAGTGGAAGAGATCTTCTGATCTTGATCTCAATGGTGAAGCTGTGCCGGATGAGGATGATGATGGTGGTATTGCCGCTCCTTTGCATGAGGATCATGTGCAAAATGAAGTAATGACAAATGATGATGTTTTGGGAGATGCAATACCTTATGACCAGCAAGATGCAATGCGGCAATTCTGCTATCATTCACTTAAGTTGGGTACAGGGGCAAAAGGGAACTCGCAATTTCCAGGATCACACCCAGTATCTCTCAACAGGGACAACTTGCAACTTTTAAGGCAGCGCTATTACTATGCTACATGGAAAGCTGATGGAACCCGATATATGATGCTTATAACTTGTGATGGATGTTACTTGATCGATAGAAACTTTTGTTTTCGAAGGGTCCAGATGCGATTTCCATCAAGACAAACAAATGAGGGTCTAGCTAAAGAGACTCACAACTTAACGTTACTTGATGGTGAGATGGTGATTGACACTCTGCCAGATACACAGAAACAGGAGAGAAGATACCTGATCTATGATCTAATGGCAATTAATCAAGTGTCTGTCATAGAGCGGCCTTTCTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGAAATCTTGAACGCCAGTATATTGTCCAGAGTAGAAATCCTTATTACAGATATGACATGGAACCGTTCAGAGTGAGAAGGAAGGACTTTTGGTTGTTATCTACTGTTACAAAGCTTCTAAAGGAATTCATTCCGAGGCTTTCACATGCAGCAGATGGTCTTATTTTTCAGGGTTGGGACGATCCTTATGTGCCCCGTACCCATGAAGGCCTCTTAAAGTGGAAATATCCTGAAATGAACTCGGTCGATTTTCTTTTTGAGGTGGTGGATGAAAATCGTCAGCTACTTTTTCTTTATGAGCGAGGCAAAAAAAAGCTTATGGAAGGGAATCGTGTTTTGTTTAAAGATGTATCAGATCCCTCAGCATACTCGGGGAAGATTATAGAGTGTTCCTGGGATTCTGAGGAAGACGTTTGGGTATGTATGCGGATCAGGGCAGACAAGTCAACTCCAAACGATTTCAATACTTACAAGAAGGTGATGAGGAGCATAAGGGATAATATTACAGAGGATGTTTTGCTGAACGAGATTGGCGAGATTGTTCGTCTACCCATGTATGCTGATAGGATAAGGAATGATAGCAAAGCCCACTTGCACCACCAGCACTCAAATTCAGGGAGACGCAGGTGA 2061 0.4192 MIISMDLNASPLPEEDEEAIFEGHVEEETAVEEHIETAVETLRREREERRRRLKREFSDEGPKRVVQPPKKDTVIQIKNSRYYDRNKLPPGWLDCPAYGQVVGYIIPSKVPLGESFNDFVVPGKRYSLRQVIHQQRVLGRELGLVIDLTNTTRYYQPSDWKKQGIKHVKIACRGRDSVPDNESVNNFVYEVLQFFSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSISVTEALQIFANARPPGIYKQDYIDALYTFYHERKPETIIYPPTPEWKRSSDLDLNGEAVPDEDDDGGIAAPLHEDHVQNEVMTNDDVLGDAIPYDQQDAMRQFCYHSLKLGTGAKGNSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITCDGCYLIDRNFCFRRVQMRFPSRQTNEGLAKETHNLTLLDGEMVIDTLPDTQKQERRYLIYDLMAINQVSVIERPFYERWKMLEKEVIEPRNLERQYIVQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLKEFIPRLSHAADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEVVDENRQLLFLYERGKKKLMEGNRVLFKDVSDPSAYSGKIIECSWDSEEDVWVCMRIRADKSTPNDFNTYKKVMRSIRDNITEDVLLNEIGEIVRLPMYADRIRNDSKAHLHHQHSNSGRRR* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00055 686 CDD RNA_5'-triphosphatase 91 257 - -
Eupl10g00055 686 ProSiteProfiles ATP-dependent DNA ligase family profile. 436 581 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Eupl10g00055 686 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 277 IPR029021 -
Eupl10g00055 686 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311|GO:0016791
Eupl10g00055 686 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
Eupl10g00055 686 SUPERFAMILY Nucleic acid-binding proteins 555 668 IPR012340 -
Eupl10g00055 686 PANTHER MRNA-CAPPING ENZYME 83 665 - -
Eupl10g00055 686 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 553 - -
Eupl10g00055 686 Pfam Dual specificity phosphatase, catalytic domain 141 260 IPR000340 GO:0008138|GO:0016311
Eupl10g00055 686 FunFam mRNA capping enzyme family protein 551 660 - -
Eupl10g00055 686 CDD Adenylation_mRNA_capping 345 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Eupl10g00055 686 Gene3D DNA ligase/mRNA capping enzyme 305 550 - -
Eupl10g00055 686 Gene3D - 551 660 IPR012340 -
Eupl10g00055 686 PIRSF mRNA_capping_HCE 74 686 IPR017074 GO:0004484|GO:0006370|GO:0140818
Eupl10g00055 686 Pfam mRNA capping enzyme, C-terminal domain 557 651 IPR013846 -
Eupl10g00055 686 Pfam mRNA capping enzyme, catalytic domain 354 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Eupl10g00055 686 Gene3D Protein tyrosine phosphatase superfamily 82 296 IPR029021 -
Eupl10g00055 686 FunFam mRNA capping enzyme family protein 84 298 - -
Eupl10g00055 686 FunFam mRNA capping enzyme, putative 313 550 - -
Eupl10g00055 686 ProSiteProfiles Dual specificity protein phosphatase domain profile. 117 266 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00055 Eupl-Chr10 6999621 7093420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00055 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 68.289 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00055 K13917 - nnu:104597018 1169.84