Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00053 ATGACTGATAAATCCCAATCCAAACCCAAAGAAGTCATGAGGCCGATTCAGCCTCCACTGGCCACCACCAACACGAGCCGTCCACGGCGGAAGCCTGACCTGACTCTCCCTCTCCCAAAACGCGATCCATCTCTAGCCGTTCCTCTCCCTCTCCCACCTGCCTCTGTCCCCTCCGCCGCTTCCTCCTCTCAACAACAATCAACTCATCATCTAATTCCATCGAGTTTCGCTGAACTCGACCGAGAGCGTCGCATCGGCAGGGGCAGCGGCGGCACTGTCTACAAGGTACGACACCGCCCCACCGGTAGATCCTACGCTCTCAAGGTGATCAACGGCAACCACGAGGACTCTGTCCGCCGTCAGATGTGCCGCGAGATCGAGATCCTTCGCACTGTCGACAACGCTAACGTGGTCAAGTGCCACGGCATGTTCGACAACGCTGGCGAGATACAGGTTCTTCTCGAGTACATGGACGGCGGATCTCTCGAAGGGACCCACATCCCCCAGGAGCCCTTTCTAGCTGATCTCGCCCGCCAGATCCTCTGCGGTCTCTCCTACCTCCACCGTCGTAAGATCGTCCACCGTGACATCAAACCCTCCAATCTCCTCATCAACTCCCGTAAACAGGTCAAGATCGCTGACTTTGGCGTCAGCCGTATCCTCGCTCAAACCATGGATCCCTGCAATTCTGCGGTGGGGACGATCGCTTACATGAGCCCCGAGCGGATTAACACCGATCTCACTCAGGGGGTTTACGATGGGTACGCCGGCGATATATGGAGTCTGGGTGTGAGCATATTAGAATTCTATTTGGGGAGATTTCCTTTTGCTGTTGGTCGACAGGGCGATTGGGCGAGTCTAATGTGCGCAATTTGCATATCGCAACCACCGGAGGCACCATCCACAGCGTCGATTGATTTTCGAAATTTCGTGGCGTGTTGTCTACAGAGAGATTGGGCGAAGCGGTGGACTGCCGCGGAGCTGCTGCGCCATCCTTTTATTTTACAGAACAACAGGCACATCAGCAATCACAACACCACTTAG 1044 0.5536 MTDKSQSKPKEVMRPIQPPLATTNTSRPRRKPDLTLPLPKRDPSLAVPLPLPPASVPSAASSSQQQSTHHLIPSSFAELDRERRIGRGSGGTVYKVRHRPTGRSYALKVINGNHEDSVRRQMCREIEILRTVDNANVVKCHGMFDNAGEIQVLLEYMDGGSLEGTHIPQEPFLADLARQILCGLSYLHRRKIVHRDIKPSNLLINSRKQVKIADFGVSRILAQTMDPCNSAVGTIAYMSPERINTDLTQGVYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMCAICISQPPEAPSTASIDFRNFVACCLQRDWAKRWTAAELLRHPFILQNNRHISNHNTT* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00053 347 FunFam Mitogen-activated protein kinase 2 159 346 - -
Eupl10g00053 347 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Eupl10g00053 347 Gene3D Phosphorylase Kinase; domain 1 56 158 - -
Eupl10g00053 347 MobiDBLite consensus disorder prediction 1 96 - -
Eupl10g00053 347 Pfam Protein kinase domain 81 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00053 347 MobiDBLite consensus disorder prediction 56 73 - -
Eupl10g00053 347 CDD PKc_MAPKK_plant_like 77 334 - -
Eupl10g00053 347 ProSiteProfiles Protein kinase domain profile. 79 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00053 347 SMART serkin_6 79 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl10g00053 347 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 23 336 - -
Eupl10g00053 347 SUPERFAMILY Protein kinase-like (PK-like) 81 339 IPR011009 -
Eupl10g00053 347 Gene3D Transferase(Phosphotransferase) domain 1 162 346 - -
Eupl10g00053 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00053 Eupl-Chr10 6641577 6643819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00053 13 336 MAP Kinase Kinase Gene Family AT1G51660 70.833 3.52e-166 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Eupl10g00053 Pkinase 1.4e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00053 K13413 - nnu:104603135 494.197