Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g00032 ATGTATGTGTCTGAACTCGATGACTCAATGGAATTGAAGAAGGAGAAGGTAGTGAGGTTTTATCCTGATGGAAAACAACACCTTGAATTGCCATGTGAAAAACCTGATTCTCCCAACCTAGAAAAGCCCTCACCTTCACCTGTATACAAGGTTTCAGCTCCTTTGCTGAAACTTGATGGCGGTGGTGGCGGCGGTGGCGGTGGCGGAGATGGTGGTGGGTATAGAAGTAGAATTACTGAGACTCTGAAATTTGGGAGGTCTAAAGTATTTTCCGAGGACCATGAGCCCTGGGGGCAGAGGATACTGGATCCGGGAAGCGAGCTTGTCTTGCAATGGAATCGGGTTTTCCTTTTCTCGTGCTTGGTGGCTCTTTTTGTTGACCCATTGTATTTCTATCTCCCTTCAATGGGTGTCGTCAGAGACTCTTCATGTATCAAGATGGATTTGAATCTGAGAATTGTTGTGACCTTTTTCCGAACTATTGCCGATATGTTATATTTATTGCACATGGTCATCAAGTTTCGGATGGCATATGTAGCTCCAAGCTCACGGGTATTTGGGAGGGGTGAACTTGTCATGGATCCAAAGAAGATTGCCAGGAGGTACTTAAGATCAGATTTCTTTATAGATTTGGCAGCAACACTGCCTCTTCCTCAGATTGTCATCTGGTTCATTATACCAGCAATTAGGAACACCCATTCTGATCATAACAACAATGCCCTTATGCTGATTGTTCTGCTCCAATATGTTCCCAGATTATATCTGATTTTCCCGTTAAGTTCTCAAATTATCAAAGCTACTGGAGTAGTCACGAAAACTGCTTGGGCTGGGGCTGCATATAATCTGCTACTGTATATGTTAGCTAGTCATGTCTTGGGGGCATCATGGTATATACTGTCAATCGAACGACATACAACATGCTGGAAATCAGAATGCAAAAAGGAAGTTAACCCTATAAAGTGCAGTTTGATATATTTAGACTGTGATACTTTCAACCATGATGATCGTAGGATTTGGGTGAACAGCACAGCTGTCTTCAATAACTGTGATCCTGACAATAAAATCACTTTCAACCATGGCATATTTGAAAATGCTGTGACTAATAAAGTTCTCTCCTCAAATTTCCTTGAGAAATACTTCTATTGTCTATGGTGGGGCCTACAGAACTTAAGTTCATATGGGCAGAATTTGTCAACAAGCACGTTTATTGGGGAAACCTCATTTGCCATACTCATTGCCATTCTGGGTCTGGTTTTATTTGCCCATCTGATTGGAAACATGCAGACCTACCTGCAATCTATCACGGTGAGGCTTGAGGAGTGGAGACTTAAGAGAAGAGACACTGAAGAATGGATGAGACATCGGCAACTCCCTCAGGATTTGCGGGAACGTGTTCGGCGGTTTGTTCAATACAAGTGGCTAGCAACCCGTGGAGTAGATGAAGAAACTATCCTGCATGCCTTGCCTACAGATCTCCGTCGAGATATCCAACGCCACCTATGCTTGGACCTTGTTCGACGTGTATGTTTTCTCCCCATTCTCTTGTCTAGTTCTATAGATCTGAAGACACCAGAATCTGTTCTGATGTGTTCTTTGATATTCTTTTATTAA 1611 0.4283 MYVSELDDSMELKKEKVVRFYPDGKQHLELPCEKPDSPNLEKPSPSPVYKVSAPLLKLDGGGGGGGGGGDGGGYRSRITETLKFGRSKVFSEDHEPWGQRILDPGSELVLQWNRVFLFSCLVALFVDPLYFYLPSMGVVRDSSCIKMDLNLRIVVTFFRTIADMLYLLHMVIKFRMAYVAPSSRVFGRGELVMDPKKIARRYLRSDFFIDLAATLPLPQIVIWFIIPAIRNTHSDHNNNALMLIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYILSIERHTTCWKSECKKEVNPIKCSLIYLDCDTFNHDDRRIWVNSTAVFNNCDPDNKITFNHGIFENAVTNKVLSSNFLEKYFYCLWWGLQNLSSYGQNLSTSTFIGETSFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMRHRQLPQDLRERVRRFVQYKWLATRGVDEETILHALPTDLRRDIQRHLCLDLVRRVCFLPILLSSSIDLKTPESVLMCSLIFFY* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g00032 536 FunFam Cyclic nucleotide-gated ion channel 1 437 501 - -
Eupl10g00032 536 SUPERFAMILY cAMP-binding domain-like 440 512 IPR018490 -
Eupl10g00032 536 Gene3D Helix hairpin bin 438 501 - -
Eupl10g00032 536 SUPERFAMILY Voltage-gated potassium channels 108 432 - -
Eupl10g00032 536 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 91 511 - -
Eupl10g00032 536 Pfam Ion transport protein 112 437 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl10g00032 536 Gene3D - 129 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g00032 Eupl-Chr10 4768380 4777609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g00032 19 508 Ion Channels AT2G24610 66.599 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g00032 K05391 - psom:113301448 808.905