Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01477 ATGGGTCGTTGCATTGGCTTAGTCGGGTTCGTGCTTGTTTTAATGGCTGTGCTTCAGGGTGCAACCGCACAGACAACACATATCGTCTTAGACAGCTTGGGATGGATAATCCCACCCGGCGGTGCTGTCGCCTACAGCACCTGGGCTTCCACCAAGACTTTCGTTGTTGGCGATACTCTTGTCTTCAACTTCACATCCGGACAACACGACGTAGTGGAAGTGACAAAGGCAGCTTACGATGCCTGCAACACGACGAACCCTATCGGTTCGATTCAAAATAGCGGACCGGCAAACATCACTTTGAACTCAGAAGGCGAGCACTACTACATTTGCACCTTTGGCCAGCACTGTGCGGGAGGCCAAAAGTTAGCCATTACCGTGACTGCCTCTTCCGGAACTGCCACTCCTCCTTCCATCGGGTTCGTGCTTGTTTTAATGGCTGTGCTTCAGGGTGCAACCGCACAGACAACACATATCGTCTTAGACAGCTTGGGATGGATAATCCCACCCGGCGGTGCTGTCGCCTACAGCACCTGGGCTTCCACCAAGACCTTCGTTGTTGGCGATACTCTTGTCTTCAACTTCACATCCGGACAACACGACGTAGTGGAAGTGACAAAGGCAGCTTACGATGCCTGCAACACGACGAACCCTATCGGTTCGATTCAAAATAGCGGACCGGCAAACATCACTTTGAACTCAGAAGGCGAGCACTACTACATTTGCACCTTTGGCCAGCACTGTGCGGGAGGCCAAAAGTTAGCCATTACCGTGACTGCCTCTTCCGGAACTGCCACTCCTCCTTCCAGTATTAGTACCCCACCTCCATCACCACCCATGACTCCTGGCGGCCCAACTTCTGATTCTCCTCCCCCATCACAAATCACCACACCTGCTGATTGCACCCCAACCCCATCGTCAGCCCCCACACCGGGGGGACCAATCCCTCACGTGAACGCGCCTTCCCAATCACCAACCACCACTCCCAGCTCAGCCTCATCTCTTCTAACTCCCACCAGATTATCTGCCGCCGCCTTCTCTCTTGCCATTGGTTTTTTACTTTAG 1065 0.5333 MGRCIGLVGFVLVLMAVLQGATAQTTHIVLDSLGWIIPPGGAVAYSTWASTKTFVVGDTLVFNFTSGQHDVVEVTKAAYDACNTTNPIGSIQNSGPANITLNSEGEHYYICTFGQHCAGGQKLAITVTASSGTATPPSIGFVLVLMAVLQGATAQTTHIVLDSLGWIIPPGGAVAYSTWASTKTFVVGDTLVFNFTSGQHDVVEVTKAAYDACNTTNPIGSIQNSGPANITLNSEGEHYYICTFGQHCAGGQKLAITVTASSGTATPPSSISTPPPSPPMTPGGPTSDSPPPSQITTPADCTPTPSSAPTPGGPIPHVNAPSQSPTTTPSSASSLLTPTRLSAAAFSLAIGFLL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01477 354 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Eupl09g01477 354 FunFam Cupredoxin superfamily protein 155 264 - -
Eupl09g01477 354 MobiDBLite consensus disorder prediction 319 335 - -
Eupl09g01477 354 ProSitePatterns Type-1 copper (blue) proteins signature. 236 252 IPR028871 -
Eupl09g01477 354 PANTHER BLUE COPPER PROTEIN 155 272 IPR039391 GO:0009055
Eupl09g01477 354 Pfam Plastocyanin-like domain 174 252 IPR003245 GO:0009055
Eupl09g01477 354 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
Eupl09g01477 354 CDD Stellacyanin 156 258 - -
Eupl09g01477 354 ProSiteProfiles Phytocyanin domain profile. 156 260 IPR003245 GO:0009055
Eupl09g01477 354 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
Eupl09g01477 354 Gene3D - 23 130 IPR008972 -
Eupl09g01477 354 Gene3D - 154 261 IPR008972 -
Eupl09g01477 354 MobiDBLite consensus disorder prediction 269 318 - -
Eupl09g01477 354 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Eupl09g01477 354 MobiDBLite consensus disorder prediction 261 335 - -
Eupl09g01477 354 FunFam Cupredoxin superfamily protein 24 133 - -
Eupl09g01477 354 SUPERFAMILY Cupredoxins 156 260 IPR008972 -
Eupl09g01477 354 CDD Stellacyanin 25 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01477 Eupl-Chr9 31131274 31172378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01477 142 285 Phytocyanin Superfamily AT2G25060 35.417 9.41e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01477 - - nnu:104595410 328.176