Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01450 ATGGAGAGGAAGTGCGGGTGCTGGGCAGCTTTCAAGCTCGGCTTTAAGGGAACCTGCAAGTCATCTGGTTCTAGGGACACTGCTAACGCTCTCCCTCGAACCAGTCTCGTCTATGACGCAGCGACTGAGATCCGATACCTGAATGCTAGCAATCGGGAGCTCGCTGCACCCCATGAAGCTGATGAAAATTGTGATCAACTGCCGTCAGAGAAGAAAGCTCTTCGTCAACTGCTTCGGTTTACTTTTCAGGAGCTCAAGTCTGCGACTGGGAACTTCAGGCCTGATAGTATTCTTGGGGAAGGTGGGTTTGGATTTGTTTTTAAAGGATGGATTGAGGAGAATGGGACTGCCCCTGCGAAACCTGGCTCAGGTGTTACGGTTGCAGTAAAAATCCTGAAAGCAGATGGTCTTCAGGGCCACAGAGAATGGGTGGCTGAGGTTGACTTCCTTGGACAGCTTCACCACCCTAACCTTGTTAAACTTATTGGATACTGCATTGAAGATGATCAGCGTCTGCTTGTCTATGAATTTATGACACGGGGGAGTCTTGAAAACCATCTTTTCAGAAGATCCCTACCTCTTCCATGGCCCAACAGGATTAAGATTGCACTTGGTGCAGCTAAAGGACTGGCCTTTCTCCATGGAGGTCCTGAGCCTGTCATATATAGAGACTTTAAAACGTCCAACATTTTGCTTGATTCGGAATATAATGCGAAGCTCTCAGACTTTGGTCTGGCAAAAGCTGGGCCCCAGGGGGACAAAACACATGTTTCTACTAGGGTCGTTGGAACATATGGTTATGCTGCACCAGAGTATGTGATGACAGGTCACCTGACATCTAAGAGTGATGTCTACAGTTTCGGTGTTGTGCTACTTGAGATTTTAACAGGTCGAAGATCAATGGACAAGAAACGACCTAGTGGGGAGCAAAACCTTGTCGCTTGGGCCCGGCCTTATTTAGGAGATAAGCGAAAGCTGTACCAGCTAGTGGATCCTCGCTTGGAGCTGAATTACTCCATTAAAGGGGTGCAGAAGGTTGCTCAGATAGCTTACTACTGCCTCAGCAGGGATGCCAAATCTCGTCCTTCCATGGATGAAGTTGTGAAGGGTCTCACCCCTTTGCAAGATCTCAATGACCTGGCCATCTTGTCTTATCACTCTCGTTCATCTCTACAAGCTCGGCGCAAGAAGAAACCAGATGGGACCCGACAGCTCACCTATACCCAATCCAAAAGCATCAGGGACTCTCCATTGAATACGGGTAAGCAGCACTGTAGATAA 1281 0.4824 MERKCGCWAAFKLGFKGTCKSSGSRDTANALPRTSLVYDAATEIRYLNASNRELAAPHEADENCDQLPSEKKALRQLLRFTFQELKSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGVTVAVKILKADGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRSLPLPWPNRIKIALGAAKGLAFLHGGPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARPYLGDKRKLYQLVDPRLELNYSIKGVQKVAQIAYYCLSRDAKSRPSMDEVVKGLTPLQDLNDLAILSYHSRSSLQARRKKKPDGTRQLTYTQSKSIRDSPLNTGKQHCR* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01450 426 CDD STKc_IRAK 98 374 - -
Eupl09g01450 426 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
Eupl09g01450 426 ProSiteProfiles Protein kinase domain profile. 92 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01450 426 Pfam Protein tyrosine and serine/threonine kinase 96 370 IPR001245 GO:0004672|GO:0006468
Eupl09g01450 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Eupl09g01450 426 FunFam Probable serine/threonine-protein kinase PBL8 178 390 - -
Eupl09g01450 426 PANTHER OS01G0588500 PROTEIN-RELATED 74 375 - -
Eupl09g01450 426 FunFam Serine/threonine-protein kinase BIK1 59 177 - -
Eupl09g01450 426 Gene3D Transferase(Phosphotransferase) domain 1 178 390 - -
Eupl09g01450 426 ProSitePatterns Protein kinases ATP-binding region signature. 98 130 IPR017441 GO:0005524
Eupl09g01450 426 SUPERFAMILY Protein kinase-like (PK-like) 76 374 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01450 Eupl-Chr9 29933629 29940258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01450 80 371 Glycoside Hydrolase AT3G07070 55.743 2.16e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl09g01450 PK_Tyr_Ser-Thr 7.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01450 - - nnu:104592488 772.696