Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01442 ATGGCTTTCTGCGTCAGGTTTTGTTGCCGAAAGGGTTTGGATCGGAAAGAACAAGGGAAGAAGCGGCCAACATGGAGAATTTTTTCCTTGAAGGAATTACATGCCGCGACGAACAATTTTAATTACGATAACAAGCTCGGAGAAGGGGGATTCGGTAGTGTTTACTGGGGGCAGCTATGGGATGGATCTCAAATTGCTGTCAAAAGGCTGAAAGTCTGGAGCAACAAAGCTGAGATGGAATTTGCCGTCGAGGTCGAGATACTGGGCAGAGTCAGGCACAAGAATCTACTGAGTTTACGCGGCTACTGTGCTGAAGGGCAAGAGCGTCTTATAGTGTATGACTACATGCCTAACTTGAGCTTACTCTCCCATCTTCATGGGCAGCACTCAGCCGAATGCCTTCTCGACTGGGAACGACGGATGAAGATTGCAATTGGATCTGCAGATGGTATCACATATCTTCACCACCATGCAACACCACATATAATTCACAGAGATATAAAAGCAAGCAATGTGCTGCTAGATTCAGATTTCCAGGCCCAAGTTGCAGATTTCGGATTCGCAAAGCTCATCCCTGATGGGGCAACTCATGTCACCACAAGGGTAAAGGGTACCCTTGGCTACCTTGCTCCTGAATATGCCATGCTTGGGAAGGCAGCAGAGAGTTGTGATGTCTACAGCTTTGGCATACTCTTGCTTGAGCTTGCTAGCGGCAAGAAACCCATAGAGAAACTCAGTGCAACAATGAAGCGCACGATCTCTGATTGGGCCTTGCCATTGGTCCGTGAGAAGAAGTTCGATGCAGTGGCAGACCCTAAGCTGAATGGGAAGTATGTTGAAGAAGAGCTGAAGAGGTTGGTGCTTGTTGCACTCATATGTGCTCAAGGTCAGCCCGAGAAGAGACCCACCATGCTCGAGGTGGTGGACCTGCTCAAGGGAGATTCAAAAGAGAAGCTATCTGAATTGGAGAACGATGAAATGTTTAGAGAAAATCCAGCGGTAGGTTATCAAGATGGGTTATCAGGTGCAGAAGACAGCTCGGAGTTTATCTCCGAGGAGAAAGATTCGAAACAGGAGTTGAAAGAAGTGGCTGGATCTGGAATTGAAGTCGTGCATGGCAGCTAA 1125 0.4764 MAFCVRFCCRKGLDRKEQGKKRPTWRIFSLKELHAATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILGRVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWERRMKIAIGSADGITYLHHHATPHIIHRDIKASNVLLDSDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKAAESCDVYSFGILLLELASGKKPIEKLSATMKRTISDWALPLVREKKFDAVADPKLNGKYVEEELKRLVLVALICAQGQPEKRPTMLEVVDLLKGDSKEKLSELENDEMFRENPAVGYQDGLSGAEDSSEFISEEKDSKQELKEVAGSGIEVVHGS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01442 374 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01442 374 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Eupl09g01442 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Eupl09g01442 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Eupl09g01442 374 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Eupl09g01442 374 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01442 374 Gene3D Phosphorylase Kinase; domain 1 9 115 - -
Eupl09g01442 374 ProSiteProfiles Protein kinase domain profile. 40 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01442 374 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Eupl09g01442 374 PANTHER OS01G0253100 PROTEIN 21 317 - -
Eupl09g01442 374 MobiDBLite consensus disorder prediction 333 374 - -
Eupl09g01442 374 MobiDBLite consensus disorder prediction 347 362 - -
Eupl09g01442 374 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01442 Eupl-Chr9 29698990 29714606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01442 28 351 Receptor kinase-like Gene Family AT4G33430 45.833 9.90e-94 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Eupl09g01442 Pkinase 4.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01442 - - cave:132188407 642.499