Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01441 ATGGAGAAAGAAGGAACCAAGCAAGAGTTTAGGAAAGGTTCATGGAAACCAGAAGAAGACTTGCTTCTAACAAAATACATAGAAACCCATGGAGAGGGAAAGTGGGCAACTGTTTCCAAGAGATCAGGCTTAATGAGGGGAGGAAAGAGTTGCAGGCTGAGATGGAAGAATTATCTAAGACCGAACCTCAAACGGGGGAGTATGTCAGAGGAGGAAAAAGACCTCATCATACGAATGCATAAACTTCTCGGCAATCGGTCAGTTCTTTCTTTATTTTATGGCCGGCTCCCTGGTCGAACCGATAACGAAGTAAAGAATTATTGGAATACCCATTTGATCAAGAGGAACCCTCAAGGCAAAGCTGCTGCCGCGGGCTCCAAGTCTAAGAGGAGAAAACTCTCGCGTTCACTTGATACTCAACCTACTTCTGCTGGAAGTCCTAGCAACACCACCAATGGATCAGTTGAAGGGAGTGATCATCTACAAAATACTGTCCCTAACTCTGCGACGGACGACATCAAGAGCTGCCACTATGACATACAGTCCCAGTGGTTGCCTAACGAGGAGACGTTCTATGAGGATTATCCTTTCTTGCCATCCCTCGACCTCATCCTTTTGCCCGAGTTATTCAGATCTCCGATTTATTTGCCAGAGTCATCTGGCTGA 666 0.4595 MEKEGTKQEFRKGSWKPEEDLLLTKYIETHGEGKWATVSKRSGLMRGGKSCRLRWKNYLRPNLKRGSMSEEEKDLIIRMHKLLGNRSVLSLFYGRLPGRTDNEVKNYWNTHLIKRNPQGKAAAAGSKSKRRKLSRSLDTQPTSAGSPSNTTNGSVEGSDHLQNTVPNSATDDIKSCHYDIQSQWLPNEETFYEDYPFLPSLDLILLPELFRSPIYLPESSG* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01441 221 SMART sant 11 61 IPR001005 -
Eupl09g01441 221 SMART sant 64 114 IPR001005 -
Eupl09g01441 221 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 156 - -
Eupl09g01441 221 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Eupl09g01441 221 Pfam Myb-like DNA-binding domain 65 112 IPR001005 -
Eupl09g01441 221 CDD SANT 67 112 IPR001005 -
Eupl09g01441 221 Gene3D - 12 64 - -
Eupl09g01441 221 MobiDBLite consensus disorder prediction 137 168 - -
Eupl09g01441 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 116 IPR017930 -
Eupl09g01441 221 ProSiteProfiles Myb-like domain profile. 60 112 IPR001005 -
Eupl09g01441 221 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Eupl09g01441 221 FunFam MYB-related transcription factor 11 64 - -
Eupl09g01441 221 CDD SANT 14 59 IPR001005 -
Eupl09g01441 221 Gene3D - 67 140 - -
Eupl09g01441 221 MobiDBLite consensus disorder prediction 118 168 - -
Eupl09g01441 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 63 IPR017930 -
Eupl09g01441 221 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01441 Eupl-Chr9 29684471 29685634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01441 2 115 MYB Transcription Factor Family AT5G52600 72.807 1.47e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl09g01441 Myb_DNA-binding 6.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01441 K09422 - nnu:104586118 239.195