Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01440 ATGGAGCTTCAACTGGGTCTCGCTCTCCCAAACAATCCAATAATCAAAGGGTTCGACCTAAACAACCATGTTTACGAGCCTAAAGAGATGGTGGGTGGTTCCGATAAATGGAGCCATGGTCGCTGTTTGGGAGGAAAAAACAAACGTAGTTTTGATGAAGCCTTTGAAATTAATACTAAACAAACGTTGCCTCTTTTGTTGTGGAACGACCAGCCTAACGACGAGGATGATCGTAAGAGCCTCGAGAATATGCCTTCTTTCGCCATTAACAAGGGTGATAGAGAGAGAAATTATGTTGTGGGGTGGCCACCCATCAAGTCTTGCAGGAAGAAGCTTCATTATAAGCATCGAGGGGGTTGCGTTGACGACGGTCAGAGGGAGGGGAATGGCTGTGGTGGATCAAACTCCATGTACGTGAAGGTGAAGATGGAGGGAGTGGCTATCGGAAGGAAGGTTGATCTTAGCGTCCACAGTTCGTATCAGACGCTTACGAATACCTTGATCGACATGTTTGGGAAATACCAGAAAACTGTGAAGGGACCAAAAGATGGCACACGTTATACGCTCACTTACCAAGACAGAGAAGGAGACTGGCTGCTTGTTGGAGATGTACCTTGGCAGACTTTTATCCAATCAGTGCAACGCCTGAAGATGCTAAGGAGTGGAAGTTGA 672 0.4658 MELQLGLALPNNPIIKGFDLNNHVYEPKEMVGGSDKWSHGRCLGGKNKRSFDEAFEINTKQTLPLLLWNDQPNDEDDRKSLENMPSFAINKGDRERNYVVGWPPIKSCRKKLHYKHRGGCVDDGQREGNGCGGSNSMYVKVKMEGVAIGRKVDLSVHSSYQTLTNTLIDMFGKYQKTVKGPKDGTRYTLTYQDREGDWLLVGDVPWQTFIQSVQRLKMLRSGS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01440 223 Pfam AUX/IAA family 39 221 IPR033389 -
Eupl09g01440 223 ProSiteProfiles PB1 domain profile. 136 223 IPR000270 GO:0005515
Eupl09g01440 223 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 221 IPR003311 GO:0005634|GO:0006355
Eupl09g01440 223 SUPERFAMILY CAD & PB1 domains 133 217 - -
Eupl09g01440 223 Gene3D - 132 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01440 Eupl-Chr9 29647284 29650886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01440 118 221 B3 DNA Binding Superfamily AT1G19220 36.111 1.34e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Eupl09g01440 AUX_IAA 7.8e-40 CL0072