Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01431 ATGTCGAACGTGGTGGTGCTGGACAATGGCGCCGGGCTCTGCAAGGCCGGAATCGGCGGAGACAGGAATCCATCAGCTGTAGTTCCCAATTGTCTGGGTCGCCCTTCCACCTCCTCCTCTTCCAAGAAATGGCTTGTGGCCGACCAACTCCAAGCCTGCGATGACCTCACTTCCGTCTCCGTCCGCCGGCCCTTCGACCGCGGCTACCTCATTAACCCCGACCTCCAGAAGGAAATTTGGGACCGCATCTTCCGCTCCCTCCTCAACGTGGACCCCACCATCTCCTCCCTCCTCCTGGTGGAACCCCTCTTCAATCTCCCCTCCATCCAACGCTCCACCGACGAGCTTGTCTTCGAGGACTTTGGCTTCCGCTCCCTCTACGTAGCCGACTCCCCTTCCCTCGTCCACCTCTACGAGGCCAGCCGACGTCCGGACGGCCTCATCTCTAAGGTCCAGTGTAGTCTTGTCGTCGACTGTGGTTTCTCCTTCACCCATGCTGCTCCCGTTCTCCAGAATTTCACCCTCAATTATTCTGTCAAGCGCCTTGATCTTGGCGGTAAGGCTCTCACTAATTACCTCAAGGAGCTCGTCTCTTATCGATCCATTAACGTCAAGGATGAGACCTTCATTATTGATGATGTCAAGGAGAAGCTCTGTTTCGTCTCCCTCGATGTCCCCCGCGACCTCCAGATCGCCAGGAGACCGGGAAAGGACAATCTGTTCAGGTGCACGTATGTCCTTCCTGATGGTATCACACATACGAAGGGTTTTATAAAAGACCTGGATGAAGCACAGAGATACCTCACTCTGCCAGATGGGGCACCACCTCTGCCACCAGGAACAAAGGAAGAAATGGGTCATCTGGATAAAACTGAAAAACCAGAAGACAGGAAGAGGATTGATTTGACAAAAAATGAGTTTCACTTGACCAATGAGCGGTTCCTTGTCCCTGAGATGATTTTCCGTCCTGCTGATTTGGGAATGAACCAGGCTGGACTGGCGGAGTGCATTGTTCGAGCTGTTAATTCCTGCCATCCTCATCTTCACCCTGTACTTTATGAAAGCATTATCTTGACTGGTGGAAGCACATTGTTTCCTCGATTTGCTGAAAGACTAGAACGGGAGCTCCGACCTCTCGTACCTGATGACTACCAAGTGAAGATAACAACTCAAGAAGATCCAATCTTAGGTGTATGGAGAGGGGGATCGCTTTTGGCATCTAGCCCTGATTTCGAGGCAATGTGCGTCACCAAATCCGAGTATGAGGAGCTTGGATCTACTCGCTGTCGCCGGAGGTTTTTTCACTGA 1308 0.5237 MSNVVVLDNGAGLCKAGIGGDRNPSAVVPNCLGRPSTSSSSKKWLVADQLQACDDLTSVSVRRPFDRGYLINPDLQKEIWDRIFRSLLNVDPTISSLLLVEPLFNLPSIQRSTDELVFEDFGFRSLYVADSPSLVHLYEASRRPDGLISKVQCSLVVDCGFSFTHAAPVLQNFTLNYSVKRLDLGGKALTNYLKELVSYRSINVKDETFIIDDVKEKLCFVSLDVPRDLQIARRPGKDNLFRCTYVLPDGITHTKGFIKDLDEAQRYLTLPDGAPPLPPGTKEEMGHLDKTEKPEDRKRIDLTKNEFHLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNSCHPHLHPVLYESIILTGGSTLFPRFAERLERELRPLVPDDYQVKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSTRCRRRFFH* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01431 435 Gene3D - 5 128 - -
Eupl09g01431 435 PANTHER ACTIN 4 426 IPR004000 -
Eupl09g01431 435 MobiDBLite consensus disorder prediction 272 297 - -
Eupl09g01431 435 FunFam Actin-related protein 6 129 189 - -
Eupl09g01431 435 FunFam ARP5 actin-related protein 5 homolog 331 397 - -
Eupl09g01431 435 Gene3D - 331 397 - -
Eupl09g01431 435 Pfam Actin 3 434 IPR004000 -
Eupl09g01431 435 FunFam Putative actin-related protein 5 398 426 - -
Eupl09g01431 435 Gene3D - 398 426 - -
Eupl09g01431 435 SMART actin_3 2 434 IPR004000 -
Eupl09g01431 435 SUPERFAMILY Actin-like ATPase domain 152 434 IPR043129 -
Eupl09g01431 435 Gene3D - 129 189 - -
Eupl09g01431 435 Gene3D Actin; Chain A, domain 2 32 64 - -
Eupl09g01431 435 Gene3D Actin; Chain A, domain 4 293 330 - -
Eupl09g01431 435 Gene3D Actin; Chain A, domain 4 190 252 - -
Eupl09g01431 435 MobiDBLite consensus disorder prediction 283 297 - -
Eupl09g01431 435 SUPERFAMILY Actin-like ATPase domain 3 136 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01431 Eupl-Chr9 29362454 29382602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01431 5 434 Cytoskeleton Gene Families AT3G12110 27.689 5.72e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01431 K11662 - nnu:104586108 787.334