Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01413 ATGATTTCCTTATCAATGAGTACTCAAAATTGGTATTTGGACTGTGTTATTTCGATGAGAATGGCGTTAGTAGTGTTGGGTCTGTCGATTTTAGGACAGTTGCCGATCATCTCTGTCGCTGGGTCAGTGACTTGGTCAAAGAGTTGTGGAGCCAACTGGATCACGTATTCGAGTTCATCGGACCAAGAGTTGTTTTACATAAACGGGAATACAGTAGACAAAGTTTCCTTCTGTGGAGCCCTTAAATACTACTACGCAAATGGGTGTTTCTTCGATTCTAGTTTGGAAGAATGGAGAGTTGGACGGAACAACTGTGGCTTGGAACCTTCCCTGGTGGCGTTGCCTCACAGGGTAGGAAGAAAACTTTTGCTGGGGTCAGGAACAAATGAATCCAAAATACGTCACTTCGTTCAGAAAAGCCATCCAAGAGAAGAAAACCATGATCACAGTTTTTTGTTAGCCCCAAAGACCATGGTCATGGCAGTTCCAGGGATGTTCCTTCTGTGTTGCAGTTTTCTTTGTCCATGCTTCCGTTCAAGAAGGAAAGAAACTGCCCATACTGCTCTTACTAGGGATCCGAGTTCAATGGATTCGATTTCGCCTTTTGAAGTAGGCTCTTCTTCTGAAAAAGTCCCAAGCAGCCCACTTCGAGTGCCACCTTGTCCTGGCTTCTCGATGTCCCCGAAATTAAGTAGAATTGGATCAGTACACCTCAATATGAGTCAGATTATCAAAGCTACCCACAACTTCTCACCATCACTACAGATAGGCGAAGGAGGCTTTGGAACTGTCTACAGGGCTCAGTTGCAAGATGGCCAGGTTGTTGCCATTAAGCGTGCAAAGAAGGAACACTTCACCACTCTACGAGCTGAATTTTGTAGTGAAATTGAACTACTATCCAAAATTGAACATCGAAATCTAGTGAAGCTTCTTGGATATGTTGATAAAGGGAATGAACGCATTATCATTATAGAGTATGTTCCAAATGGTACTCTTAGGGAGCATCTAGATGGTGAGCGTGGAAAAATATTGGATTTTAATCAACGGTTAGAAATTTCCATTGATGTTGCTCATGCCCTGACTTATCTCCATCTGTATTCAGAGAAGCAGATAATTCATCGAGATGTGAAAGCATCCAATATTCTGCTGACGGAGAGCTTGAGAGCCAAGGTGGCCGATTTTGGGTTTGCCAGACTTGGTCCAATGGAGGAAGCTGATCAAACACATATTTCAACCAAAGTGAAAGGGACAGCGGGTTACCTCGATCCTGAATATCTGAAGACCTATCAAGTCACCCCCAAGAGCGATGTGTATTCGTTTGGAATTTTGCTCATAGAAATTCTGACTGGGCGTCGCCCGGTGGAGTTTAAGAGAGCTGCCAATGAGAGGGTCACCGTCAGATGGGCCTTCAAGAACTATAATGAAGGAAACGTGGTGGAGATGTTGGATCCTTCAATGGATGAAGTGGTAGATGCGGAAATACTGTCAAGGATGTTTGGTTTGGCATTCCAATGTGCCGCACCCACGCGGTTTGATCGGCCAAACATGAAAGAAGTGGGAGAACTACTGTGGGGAATAAGGATGAGCTACATTAAAAGTGTCAAGAAAGGGGAATTGTGA 1620 0.4414 MISLSMSTQNWYLDCVISMRMALVVLGLSILGQLPIISVAGSVTWSKSCGANWITYSSSSDQELFYINGNTVDKVSFCGALKYYYANGCFFDSSLEEWRVGRNNCGLEPSLVALPHRVGRKLLLGSGTNESKIRHFVQKSHPREENHDHSFLLAPKTMVMAVPGMFLLCCSFLCPCFRSRRKETAHTALTRDPSSMDSISPFEVGSSSEKVPSSPLRVPPCPGFSMSPKLSRIGSVHLNMSQIIKATHNFSPSLQIGEGGFGTVYRAQLQDGQVVAIKRAKKEHFTTLRAEFCSEIELLSKIEHRNLVKLLGYVDKGNERIIIIEYVPNGTLREHLDGERGKILDFNQRLEISIDVAHALTYLHLYSEKQIIHRDVKASNILLTESLRAKVADFGFARLGPMEEADQTHISTKVKGTAGYLDPEYLKTYQVTPKSDVYSFGILLIEILTGRRPVEFKRAANERVTVRWAFKNYNEGNVVEMLDPSMDEVVDAEILSRMFGLAFQCAAPTRFDRPNMKEVGELLWGIRMSYIKSVKKGEL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01413 539 ProSitePatterns Protein kinases ATP-binding region signature. 256 282 IPR017441 GO:0005524
Eupl09g01413 539 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 144 527 - -
Eupl09g01413 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Eupl09g01413 539 CDD STKc_IRAK 256 523 - -
Eupl09g01413 539 SMART serkin_6 250 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01413 539 ProSiteProfiles Protein kinase domain profile. 250 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01413 539 SUPERFAMILY Protein kinase-like (PK-like) 233 526 IPR011009 -
Eupl09g01413 539 MobiDBLite consensus disorder prediction 189 213 - -
Eupl09g01413 539 Gene3D Transferase(Phosphotransferase) domain 1 327 537 - -
Eupl09g01413 539 Pfam Protein tyrosine and serine/threonine kinase 255 521 IPR001245 GO:0004672|GO:0006468
Eupl09g01413 539 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 327 537 - -
Eupl09g01413 539 Gene3D Phosphorylase Kinase; domain 1 225 326 - -
Eupl09g01413 539 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 222 326 - -
Eupl09g01413 539 MobiDBLite consensus disorder prediction 186 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01413 Eupl-Chr9 29144413 29169227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01413 235 529 Receptor kinase-like Gene Family AT5G59700 45.270 5.05e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Eupl09g01413 PK_Tyr_Ser-Thr 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01413 - - msin:131258375 711.449