Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01350 ATGTGTGTGAAGGACGCAGAGCAGGTGGGGGAAGGAATGGAAAAATTGGATCTCTGTGAGCAAGAAAAGCCATGGTCTTTGCATTCCGGATTCATGAACACCCAGATTGAAAATTGGGACAAAGATTCGCCAAAAAGTCCCACTGATCGGATTTGTTCCGGAAACGAATCACCCAGAACCAATTCATCACCACTGGAAAGCATTTGTGAGAATGCGGCGGTCGTAGACAGCGAACAAAACCAGTTGCCGAGTTTTGTTCCCACGATTCGATCCGGAGAGTGGTCTGATATCGGTGGCCGTCCTTATATGGAGGATACCCATGTCTGCATTGGTGATCTCGCTAAGAAATTCGGTCACCATTTCCTTGATGGGGAGGCAATCTCCTTCTTTGGTGTATTTGATGGACACGGAGGAAAGGGTGCCGCACATTTTGTACGTGACAATTTGCCGAGGGTGATTGTGGAGGATGCTGATTTCCCTTTGGAACTTGAGAAAGTTATCACAAGGTCATTTATGCAGACAGATGCTGCGTTTGCAAAGAAATCCTCTCTTCAGTCCACCATGTCTTCTGGCACAACTGCACTCACTGCAATGATATTTGGGAGATCTCTACTAGTAGCAAATGCAGGGGACTGTCGGGCAGTGCTGTCACGACTTGGAGTGGCTATAGAAATGTCTAAGGATCACAGGCCCTGTTGTACAAAGGAAAGGAAGCGCATTGAATCCCTGGGCGGGTACATTGATGATGGTTATTTGAATGGGCAGTTGGGTGTAACTCGAGCTCTGGGTGATTGGCACATTGATGGGATGAAGGAAATCAGTGAACAAGGTGGGCCCTTGAGTGCTGAACCAGAACTGAAATTGATCACACTAACAAAAGAAGATGAGTTCTTGATCATTGGCAGCGATGGAATATGGGATGTATTTAGAAGCCAAAACGCCATAGACTTTGCTAGGAGGAGACTCCAAGAGCACAACAATGTGAAGCTGTGCTGCAAGGAAATGGTGGAGGAGGCTATAAAGCGGGGGGCGACTGACAATCTGACAATTGTGATTGTGTGCTTTCACTCAGACCTGCCTCCCAATGTTGTTGTTAATAGGTCTAGAATCAGAAAGAGCATATCCGCAGAGGGACTTCACAATCTCAAATGTCTATTAGAAGGGTAA 1167 0.4662 MCVKDAEQVGEGMEKLDLCEQEKPWSLHSGFMNTQIENWDKDSPKSPTDRICSGNESPRTNSSPLESICENAAVVDSEQNQLPSFVPTIRSGEWSDIGGRPYMEDTHVCIGDLAKKFGHHFLDGEAISFFGVFDGHGGKGAAHFVRDNLPRVIVEDADFPLELEKVITRSFMQTDAAFAKKSSLQSTMSSGTTALTAMIFGRSLLVANAGDCRAVLSRLGVAIEMSKDHRPCCTKERKRIESLGGYIDDGYLNGQLGVTRALGDWHIDGMKEISEQGGPLSAEPELKLITLTKEDEFLIIGSDGIWDVFRSQNAIDFARRRLQEHNNVKLCCKEMVEEAIKRGATDNLTIVIVCFHSDLPPNVVVNRSRIRKSISAEGLHNLKCLLEG* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01350 388 FunFam Probable protein phosphatase 2C 22 73 358 - -
Eupl09g01350 388 Pfam Protein phosphatase 2C 102 347 IPR001932 -
Eupl09g01350 388 PANTHER PROTEIN PHOSPHATASE 2C 68 353 IPR015655 GO:0004722|GO:0006470
Eupl09g01350 388 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Eupl09g01350 388 MobiDBLite consensus disorder prediction 48 64 - -
Eupl09g01350 388 SUPERFAMILY PP2C-like 81 356 IPR036457 -
Eupl09g01350 388 SMART PP2C_4 80 353 IPR001932 -
Eupl09g01350 388 MobiDBLite consensus disorder prediction 37 64 - -
Eupl09g01350 388 CDD PP2Cc 89 355 IPR001932 -
Eupl09g01350 388 Gene3D - 72 359 IPR036457 -
Eupl09g01350 388 ProSiteProfiles PPM-type phosphatase domain profile. 90 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01350 Eupl-Chr9 27143529 27146286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01350 70 388 PP2C-type Phosphatase Gene Family AT2G25620 56.966 2.80e-130 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Eupl09g01350 PP2C 3.5e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01350 K14803 - nnu:104588499 624.78