Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01333 ATGGCTGGTATGCTCCCTGGTGTCGAATGCGCTCGTCGGAGACGATTCCATCAAGGAGGAGGATGTACAGACTCGCAAAGCTTAGCGGGGCACGGCCGATCGAGACACTCGTCTTTCTGTTTGTACACAAGCAACCATGAAACCCATCTCAATTCAAGCTCGTCATCTCTGCACCAGCGAAGAAATTCATTGAACCAGAGCTTCCAGTGTGATAAGCTTGGAGGTGTTGCTAGAGAAGCCAAGGAGAGATTAGATGAGAGGTTGAGGACCCAACGGAAATCAGAAACTAAGAGGCATACTGGCGAAGGGATCACGAAGTGTGAGGATGGTGTCGGAGTTTTACGTTCGGTGGTCGTTAGGGACCTGCAAACAGAGGTGTTCGGCTCGAAGAAGAGTAGCTCGAAGAGGTTCAGTTGGGCGAAATTCGGAACGAAGACGTTGGATATTGATGAATGTGCAGTTTGCTTAGAAGGGTTCAAAGCCGGCGAGACTCTGGTGCACCTACCGTGCTCACACCGGTTCCATTCGAGGTGCTTGATGCCGTGGCTTGAGAGCAGCGCTAATTGCCCTTGCTGCCGAACCGGAATCCTATCTTAG 597 0.5142 MAGMLPGVECARRRRFHQGGGCTDSQSLAGHGRSRHSSFCLYTSNHETHLNSSSSSLHQRRNSLNQSFQCDKLGGVAREAKERLDERLRTQRKSETKRHTGEGITKCEDGVGVLRSVVVRDLQTEVFGSKKSSSKRFSWAKFGTKTLDIDECAVCLEGFKAGETLVHLPCSHRFHSRCLMPWLESSANCPCCRTGILS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01333 198 Pfam Ring finger domain 150 193 IPR001841 -
Eupl09g01333 198 SMART ring_2 152 192 IPR001841 -
Eupl09g01333 198 FunFam Zinc finger family protein 126 198 - -
Eupl09g01333 198 PANTHER SI:CH211-59O9.10 119 197 - -
Eupl09g01333 198 ProSiteProfiles Zinc finger RING-type profile. 152 193 IPR001841 -
Eupl09g01333 198 SUPERFAMILY RING/U-box 151 196 - -
Eupl09g01333 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 196 IPR013083 -
Eupl09g01333 198 CDD RING-H2_PA-TM-RING 151 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01333 Eupl-Chr9 26751621 26753111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01333 1 89 C3H Transcription Factor Family AT2G15580 50.526 4.21e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01333 - - vvi:100241393 254.988