Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01312 ATGCAAATTCCCATGGAGATTTTCTCGAGCTTCTTCGCTGCATCTCTGCTCGTCGCCGTGACATTTGTTATAACTGTTTCGGCAGCCGATCTCTTCTCTGAAGCACTCTTGGGATTGAAATCGGGACTCGTGGATGGTTCGAACAGTTTGTATGATTGGTCTGCTTATAACGGGGGGAACCCGTCCGACGCAATCTCCGCTTGCTCGTGGTCGGGGATTACCTGTACCAAGAACTCTAGCATGATCATCGGTTTAAACCTCGCGCATAAGAATCTCTCTGGTGCAATATCTGGCAAGCACATGAAGCTCTTGACTGATCTTGTGGACCTCAACCTCAGCCATAATTCCTTCTCTGGGCAACTTCCGGAAGAAATTTTCAGTCTTGTTAATCTAAGAAGCTTAGACATCAGTAGAAACAACTTCACTGGCCCTTTCCCTGCTGGTATATCTTCAATTCAGCAACTGGAGGTGCTTGACGCATTCAGCAACAGCTTCTCGGGCTCACTGCCGCAGGAAGTTGCCCAATTGGAGTCTCTCAAGGTACTGAATTTAGCTGGGAGTTATTTTGCAGGTCCAATTCCCTTGGCTTATGGGTCCTTCAAGAGCCTCGAGTTCCTTCATCTTGCTGGAAATTTACTCGATGGCGAAATCCCTCCGGAGCTGGGGAAGCTCAAAACAGTGACCCATATGGAAATTGGCTACAATTCCTACCATGGGAATATCCCGTGGCAATTGGGGAACATGAGCGAGCTTCAGTATCTCGACATCGCTGGTGCAAATCTCTCTGGACCGATCCCCGATCATCTCTGCAATCTCACCAAGCTTCAATCCTTGTTCCTGTTCAGAAACCGACTCAGTGGTTTAATACCATGGGGTTTAGGCAATATCATGCCTCTTGCAAGCTTGGATCTGTCCGATAACTTAATTTCCGGGTCCATACCAGAAAGCTTTGCACACTTGAAGAATCTCCGTCTACTGAGCCTTATGTACAATGATATGAGTGGCTCCGTTCCTGAGGGAATCGCAGACCTTCCACTCCTGGATACTCTTCTCATATGGAGCAATTTCTTCTCCGGACCACTGCCGCAGAGCTTGGGCAAGAACTCTAGACTAAAATATGTGGATGTTTCTACAAATAGCTTCACAGGAAGTATTCCGACGGGTATCTGTACAGGAGGTATGCTGTTAAAGCTGATCCTCTTCTCCAATAATCTAACAGGTAGCCTTTCTCCTGCTCTCACCAATTGTTCTTCCCTTGTCCGTCTCCGGGTAGAAGAAAATTCATTCTCTGGTGAGATCCCTTTGAAATTTACTCTTGTTCCTGATGTCACATATGTGGACCTATCTAGAAACAGGTTTACAGGAGGGATCCCCACAGATATATTCCAAGCTTCCAAGCTTCAGTACTTCAATGTCTCTCAGAATCCAGACCTAGGAGGCATTATCCCAAGAAAAATATGGTCTTTGCCGCTACTTCAGAACTTCTCAGCATCCTCCTGTAATATCTCAGGCAATCTGCCTCCATTCGAATCCTGCAACTCTGTGTCTGTAATTGAGCTGAACAGCAACAATTTATCAGGGACTGTTCCGGAAAATGTTGTCAATTGCAAAGTTCTCGAGAGGATGGGTTTGGCTGACAATAAATTGAGAGGTGATATACCTGTGGAGCTTGCAAGTCTTCCTACCCTCAGTGTACTAGACCTATCACATAATGAATTTAACGGCTGTATACCTGTCAAATTTGGAAATTCTTCAAGCTTAGTACTTCTTGGAGCACCTCTGCAACCCTGTCCTGATTCAAAGGAAATTTCAAATGCGGCTGGTTTCAGATTGGGGAGAAAAGGCTCAGGGAAACTGACATGGGTTTTGCTATTATGTGCGGGGGTGATTTTATTCATTCTGATATCAGTTTTGGTGATCTTTTATCTTCAAAGAGAAAGTAAGGGCCAATGGAAAATGGTGCCATTTATTGGACTCCCTCGATTCACAGCGAATGATATTTTGAGGAGCTTCAGTTACACCGATCCCGCGGAGACGGCGCCACCATTATCAGCTTCAGTCTGCAAAGCAGTTCTGCCCACAGGGATAACAGTTTCAGTGAAGAAGATTGAATGGGAAGCAAAGAGAAGGGGGGTGATGTCAGAATTTATAACCCTGATTGGGAATGCCAGGCACAGGAACCTGATCAGATTGCTGGGGTTCTGCTGCAACAAGCACGTTGCCTATCTTCTTTATGACTACTTGCCTAACGGGAATCTAGCCGAGAAGATGAGAATGAAAAGGGAATTAACAATCAATACTTGGGAAGCTAAGTGCAAAATTGTGATAGGGATTGCAAGAGGGCTCTGCTACCTTCACCATGACTGTTATCCAGCAATTCCCCATGGAGATCTGAAGGCAAGTAACATAGTGTTCGATGAAAATATGGAGCCCCATCTGGCTGAATTTGGGTTGAAAACTCTATTACAAATGAATGAAGGTTCATTTCCAGTAAAGATATCCAGGACTGATTCAGTAACAGGTGAACTCAATGCTACCATAAAAGAGGAGCTCCGCAGAGATATTTACAGCTTTGGGGAGGTCCTTTTGGAGATTTTAACTAATGGCAGACTGTCAAATGCGGGAGGAAGCATACAGAGCAAACCAAGAGAAGTCATTTTACAAGAGATTTATGATGAAAATGAAGTTGGTGCCACCGATGCATTGAGAGAGGAGATAAAACTGGTGCTTGAAGTTGCTTTGCTCTGCACCAGGTGCAGGCCATCTGACAGGCCATCCATGGAAGACGCATTGAAACTTTTATCAGGGTTGAAGCCAAATAGAAACACTAGTGACTTTTGA 2841 0.4505 MQIPMEIFSSFFAASLLVAVTFVITVSAADLFSEALLGLKSGLVDGSNSLYDWSAYNGGNPSDAISACSWSGITCTKNSSMIIGLNLAHKNLSGAISGKHMKLLTDLVDLNLSHNSFSGQLPEEIFSLVNLRSLDISRNNFTGPFPAGISSIQQLEVLDAFSNSFSGSLPQEVAQLESLKVLNLAGSYFAGPIPLAYGSFKSLEFLHLAGNLLDGEIPPELGKLKTVTHMEIGYNSYHGNIPWQLGNMSELQYLDIAGANLSGPIPDHLCNLTKLQSLFLFRNRLSGLIPWGLGNIMPLASLDLSDNLISGSIPESFAHLKNLRLLSLMYNDMSGSVPEGIADLPLLDTLLIWSNFFSGPLPQSLGKNSRLKYVDVSTNSFTGSIPTGICTGGMLLKLILFSNNLTGSLSPALTNCSSLVRLRVEENSFSGEIPLKFTLVPDVTYVDLSRNRFTGGIPTDIFQASKLQYFNVSQNPDLGGIIPRKIWSLPLLQNFSASSCNISGNLPPFESCNSVSVIELNSNNLSGTVPENVVNCKVLERMGLADNKLRGDIPVELASLPTLSVLDLSHNEFNGCIPVKFGNSSSLVLLGAPLQPCPDSKEISNAAGFRLGRKGSGKLTWVLLLCAGVILFILISVLVIFYLQRESKGQWKMVPFIGLPRFTANDILRSFSYTDPAETAPPLSASVCKAVLPTGITVSVKKIEWEAKRRGVMSEFITLIGNARHRNLIRLLGFCCNKHVAYLLYDYLPNGNLAEKMRMKRELTINTWEAKCKIVIGIARGLCYLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGLKTLLQMNEGSFPVKISRTDSVTGELNATIKEELRRDIYSFGEVLLEILTNGRLSNAGGSIQSKPREVILQEIYDENEVGATDALREEIKLVLEVALLCTRCRPSDRPSMEDALKLLSGLKPNRNTSDF* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01312 946 FunFam Leucine-rich repeat receptor-like protein kinase TDR 317 592 - -
Eupl09g01312 946 Gene3D Ribonuclease Inhibitor 197 287 IPR032675 -
Eupl09g01312 946 Gene3D Ribonuclease Inhibitor 288 392 IPR032675 -
Eupl09g01312 946 FunFam Leucine-rich repeat receptor-like protein kinase 196 287 - -
Eupl09g01312 946 SUPERFAMILY RNI-like 85 436 - -
Eupl09g01312 946 Gene3D Phosphorylase Kinase; domain 1 683 747 - -
Eupl09g01312 946 Pfam Protein tyrosine and serine/threonine kinase 694 932 IPR001245 GO:0004672|GO:0006468
Eupl09g01312 946 ProSiteProfiles Protein kinase domain profile. 651 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01312 946 FunFam Leucine-rich repeat receptor-like protein kinase 30 195 - -
Eupl09g01312 946 SUPERFAMILY Protein kinase-like (PK-like) 685 934 IPR011009 -
Eupl09g01312 946 Pfam Leucine rich repeat 299 355 IPR001611 GO:0005515
Eupl09g01312 946 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 235 933 - -
Eupl09g01312 946 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Eupl09g01312 946 SUPERFAMILY RNI-like 361 589 - -
Eupl09g01312 946 FunFam Leucine-rich repeat receptor-like protein kinase TDR 748 942 - -
Eupl09g01312 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Eupl09g01312 946 Gene3D Transferase(Phosphotransferase) domain 1 748 945 - -
Eupl09g01312 946 FunFam Leucine-rich repeat receptor-like protein kinase TDR 662 747 - -
Eupl09g01312 946 Pfam Leucine Rich Repeat 130 150 IPR001611 GO:0005515
Eupl09g01312 946 SMART LRR_typ_2 104 128 IPR003591 -
Eupl09g01312 946 SMART LRR_typ_2 560 583 IPR003591 -
Eupl09g01312 946 SMART LRR_typ_2 200 224 IPR003591 -
Eupl09g01312 946 SMART LRR_typ_2 272 295 IPR003591 -
Eupl09g01312 946 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Eupl09g01312 946 Gene3D Ribonuclease Inhibitor 394 592 IPR032675 -
Eupl09g01312 946 SMART serkin_6 684 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01312 Eupl-Chr9 26334148 26338401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01312 14 935 Receptor kinase-like Gene Family AT5G51350 55.269 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl09g01312 PK_Tyr_Ser-Thr 3.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01312 - - ming:122058453 1387.86