Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01301 ATGAGAAAAGTGGATGAAGACCTAGTATCCACTGCTATTTGGGACCCGAAGACTTTTATCATTGACTTGGAGAGAGACCCGCTCTCGGAGCTAGAGCCTGAAAACACGTCGATGGAATCCAATGAGAGCTCATTGACCAAGTTAGAAACGGTCACTCAAAAATTTAGGACTGTTTTCGATTCTATTGGTCCTTTCAATTCTCGGCCGTCGCATAAAACCTTCATAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCCATCCCTCACTGGATCCGTATGAGGACCGATAACACCATCAGGTCTCCATCTCTCTATCCTTACTCTATTTCTGAGATTTTTAAATCTAAAGTTCTTTTAATCGATTTCTGCATTTTGCGCTTTCAGGTACAACGCAAAGCGCAGGCACTGGCGCCGTACCAAGCTAGGGTTTTGAGGTCGACTGTTGCTTAG 459 0.4488 MRKVDEDLVSTAIWDPKTFIIDLERDPLSELEPENTSMESNESSLTKLETVTQKFRTVFDSIGPFNSRPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRSPSLYPYSISEIFKSKVLLIDFCILRFQVQRKAQALAPYQARVLRSTVA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01301 152 FunFam 60S ribosomal protein-like L39 68 107 - -
Eupl09g01301 152 Pfam Ribosomal L39 protein 76 104 IPR000077 GO:0003735|GO:0005840|GO:0006412
Eupl09g01301 152 SUPERFAMILY Ribosomal protein L39e 70 104 IPR023626 -
Eupl09g01301 152 Gene3D Ribosomal protein L39e 69 107 IPR023626 -
Eupl09g01301 152 PANTHER RIBOSOMAL PROTEIN L39E 38 103 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01301 69 103 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 88.571 8.46e-18 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01301 K02924 - ppp:112283447 66.6254