Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01293 ATGGAAGGATTGAAGACAAACCCTTGTCTCTCAGAGACCTCAAGCATCATCTCAGTCTCTCATGAAGAAGAAAACCCAAAAGAGGAGAAACAACTAGAACAACGAGAAGAAGAGATCAAATCTAGTCTCTTACTAGATCTGACCCTCTCTAGTAAGGATTTCGATCATAGGTCGTCGAAGCCTGAACTCAATCTTATCGATTGTTTGACTGTGGGATCATCACAAACACCATTAGAGACTGAGCCAAGAGTCTTCTCTTGCAACTATTGCCGAAGGAAATTCTATAGTTCACAAGCACTTGGAGGACATCAAAACGCACATAAGAGAGAGAGGACTTTAGCAAAAAGAGGACAGCGGATGGGTATGGCTGCAGCGGCTTTTGGGCACCACAATTCACATAATCACCACCAGTTTTCAAGCATGGCTTCTCTACCTCTTCATGGTTCTTTTAATAGATCACTTGGTATTCAGGTGCATTCAATGATTCATAAGCCATCTAATTATCTACCATCTTCATCTAGTACTACTGCTTATCTTTATGGACATCATGGGTGGTCGAGACCGCCTATCGATCAACAACCGGCTATCGGAAGACTATCTATGGATAAGTATCATGTAGGCGGCGCGACGGTGGGATCAACATCGAGAGGTGGCGCCGCTAGGTTCGACGCCGGTAGGATGTTCAATTCTCCAGCTGATGAGGGACTTGGAGTTGGTGGTTATTGGTGGACAGCAGGTGGTCATGGCGGTGGTCTCGATCGTTTGAAGAATAATCAGGAGGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 816 0.451 MEGLKTNPCLSETSSIISVSHEEENPKEEKQLEQREEEIKSSLLLDLTLSSKDFDHRSSKPELNLIDCLTVGSSQTPLETEPRVFSCNYCRRKFYSSQALGGHQNAHKRERTLAKRGQRMGMAAAAFGHHNSHNHHQFSSMASLPLHGSFNRSLGIQVHSMIHKPSNYLPSSSSTTAYLYGHHGWSRPPIDQQPAIGRLSMDKYHVGGATVGSTSRGGAARFDAGRMFNSPADEGLGVGGYWWTAGGHGGGLDRLKNNQEELQKLDLSLKL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01293 271 MobiDBLite consensus disorder prediction 21 36 - -
Eupl09g01293 271 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Eupl09g01293 271 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 271 IPR044246 GO:0009788
Eupl09g01293 271 MobiDBLite consensus disorder prediction 1 36 - -
Eupl09g01293 271 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Eupl09g01293 271 Gene3D Classic Zinc Finger 65 142 - -
Eupl09g01293 271 Coils Coil 18 38 - -
Eupl09g01293 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Eupl09g01293 271 FunFam Zinc finger protein 2 66 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01293 Eupl-Chr9 25759062 25759877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01293 7 271 C2H2 Transcription Factor Family AT5G10970 44.086 1.18e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl09g01293 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01293 - - ming:122071236 305.064