Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl09g01293 | ATGGAAGGATTGAAGACAAACCCTTGTCTCTCAGAGACCTCAAGCATCATCTCAGTCTCTCATGAAGAAGAAAACCCAAAAGAGGAGAAACAACTAGAACAACGAGAAGAAGAGATCAAATCTAGTCTCTTACTAGATCTGACCCTCTCTAGTAAGGATTTCGATCATAGGTCGTCGAAGCCTGAACTCAATCTTATCGATTGTTTGACTGTGGGATCATCACAAACACCATTAGAGACTGAGCCAAGAGTCTTCTCTTGCAACTATTGCCGAAGGAAATTCTATAGTTCACAAGCACTTGGAGGACATCAAAACGCACATAAGAGAGAGAGGACTTTAGCAAAAAGAGGACAGCGGATGGGTATGGCTGCAGCGGCTTTTGGGCACCACAATTCACATAATCACCACCAGTTTTCAAGCATGGCTTCTCTACCTCTTCATGGTTCTTTTAATAGATCACTTGGTATTCAGGTGCATTCAATGATTCATAAGCCATCTAATTATCTACCATCTTCATCTAGTACTACTGCTTATCTTTATGGACATCATGGGTGGTCGAGACCGCCTATCGATCAACAACCGGCTATCGGAAGACTATCTATGGATAAGTATCATGTAGGCGGCGCGACGGTGGGATCAACATCGAGAGGTGGCGCCGCTAGGTTCGACGCCGGTAGGATGTTCAATTCTCCAGCTGATGAGGGACTTGGAGTTGGTGGTTATTGGTGGACAGCAGGTGGTCATGGCGGTGGTCTCGATCGTTTGAAGAATAATCAGGAGGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA | 816 | 0.451 | MEGLKTNPCLSETSSIISVSHEEENPKEEKQLEQREEEIKSSLLLDLTLSSKDFDHRSSKPELNLIDCLTVGSSQTPLETEPRVFSCNYCRRKFYSSQALGGHQNAHKRERTLAKRGQRMGMAAAAFGHHNSHNHHQFSSMASLPLHGSFNRSLGIQVHSMIHKPSNYLPSSSSTTAYLYGHHGWSRPPIDQQPAIGRLSMDKYHVGGATVGSTSRGGAARFDAGRMFNSPADEGLGVGGYWWTAGGHGGGLDRLKNNQEELQKLDLSLKL* | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl09g01293 | 271 | MobiDBLite | consensus disorder prediction | 21 | 36 | - | - | |
Eupl09g01293 | 271 | SUPERFAMILY | beta-beta-alpha zinc fingers | 81 | 112 | IPR036236 | - | |
Eupl09g01293 | 271 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 1 | 271 | IPR044246 | GO:0009788 | |
Eupl09g01293 | 271 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Eupl09g01293 | 271 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 87 | 107 | IPR013087 | - | |
Eupl09g01293 | 271 | Gene3D | Classic Zinc Finger | 65 | 142 | - | - | |
Eupl09g01293 | 271 | Coils | Coil | 18 | 38 | - | - | |
Eupl09g01293 | 271 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 85 | 112 | IPR013087 | - | |
Eupl09g01293 | 271 | FunFam | Zinc finger protein 2 | 66 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl09g01293 | Eupl-Chr9 | 25759062 | 25759877 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl09g01293 | 7 | 271 | C2H2 Transcription Factor Family | AT5G10970 | 44.086 | 1.18e-50 | 166 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Eupl09g01293 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl09g01293 | - | - | ming:122071236 | 305.064 |