Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01284 ATGTCCCTGCGCAGGCCACCACTCCCTCGCATCCTCCTTAACAATGTCAGCTGCATGAGAAACGCCCAAACAATTCTCCGCAACGTCAATGTGTCCGTTCATGACGGAAGTGCACTTGTGCTAACAGGCGCCAATGGCTCAGGCAAATCGACCTTCTTGCGCATGTTAGCAGGGTTTTCACGTCCCTCGGCAGGAGTGATCCTCTGGAATGGCCATGACGTGACCCAATCAGGAGTGTTCCACCAATACAAGCTCCAGCTCAACTGGCTTTCCCTCAAAGATGCCATCAAAGACAAACTCACCGTCCTTGACAATGTGCAGTGGTTCGAAGTCTTGGAAGGGAAGTGTGGCAAAGCCAGAGACGCATTGGAGCTCATGGGGCTCAGCCGCCTTGCCAATGATAAGGCAAGGATGCTCTCCATGGGGCAGCGGAAGAGGCTTCAGCTTGCAAGGCTGCTCGCGATTGATCGACCCATCTGGTTGCTTGACGAGCCGTCGGTGGCGCTGGATGCCGAGGGAGTGAGGTTGCTTGAGTACATCATCGCGGAGCATCGGAAGAAGGGAGGGATTGTGTTTGTGGCAACGCATTTGCCGATCGAGATTGAGGATGCCATGTGTTTGAGGTTGCCCCAGAGGTTCCCTAGAAGGAAAACCATGGTTGATCTGCTCGATTGA 675 0.5407 MSLRRPPLPRILLNNVSCMRNAQTILRNVNVSVHDGSALVLTGANGSGKSTFLRMLAGFSRPSAGVILWNGHDVTQSGVFHQYKLQLNWLSLKDAIKDKLTVLDNVQWFEVLEGKCGKARDALELMGLSRLANDKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDAEGVRLLEYIIAEHRKKGGIVFVATHLPIEIEDAMCLRLPQRFPRRKTMVDLLD* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01284 224 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 222 IPR005895 GO:0017004|GO:0022857
Eupl09g01284 224 SMART AAA_5 35 223 IPR003593 GO:0016887
Eupl09g01284 224 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Eupl09g01284 224 Gene3D - 8 208 IPR027417 -
Eupl09g01284 224 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 223 IPR003439 GO:0005524
Eupl09g01284 224 NCBIfam heme ABC exporter ATP-binding protein CcmA 14 208 IPR005895 GO:0017004|GO:0022857
Eupl09g01284 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 202 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01284 Eupl-Chr9 25565605 25575651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01284 25 178 Calmodulin-binding Proteins AT2G36910 29.070 9.52e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01284 - - nnu:104611060 411.764