Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01278 ATGGACACTGATCAGGATGCTGCATCAGCTCCTTCTACTCCTGCAACCCCAAGCACACCAGGGGCTCCTCTCTTTGGTGGGTTCAAGTCAGAAAGATTTGGGAATGCTAGAAGATCCCTTCTTAAGAGCTGCAAGTGTTTCAGTGTAGAGGCATGGGCTATGGAAGAAGGAACCTTGGGAGCTGTCACGTGCTCATTGCCACCGCCGCCGGTCTCACTCGCGAGAAAGGTGGGAGCAGAATTCATAGGAACCCTCATACTCATCTTTGCAGGGACAGCAACAGGCATTGTGAACCAGAAGACACAAGGCTCAGAGACACTTCTAGGCCTCGCCGCCTCCACTGGACTAGCCGTTATGATTGTCATACTCTCGACAGGTCACATCTCAGGAGCCCATCTCAATCCATCTGTCACCATTGCCTTTGCAGCTCTGAAACACTTCCCATGGAAACAGGTACCTGTGTACATTGCAGCACAAGTGATGGCCTCCATCTGTGCTGCCTTTGCACTGAAGGGGATTTTCCATCCTTTCATGGGTGGTGGAGTTACTGTTCCCTCTGGTGGTTATGGTCAGGCTTTTGCTTTGGAGTTCATCATCAGCTTCAACCTCATGTTCGTTGTTACGGCAGTGGCCACCGACACAAGAGCTGTGGGAGAGCTAGCAGGGATCGCAGGTTGGAGCTACTGTTATGCTAAACATACTAATTGCAGGGGAAACAACAGGAGCATCCATGAACCCTGTAAGAACTTTGGGACCAGCCATAGCTGCAAACAACTACAAGGCCATCTGGGTCTACCTCACTGCCCCAATCCTCGGCGCACTTTGTGGAGCCGGTGCCTACTCTCTTGTTAA 852 0.5141 MDTDQDAASAPSTPATPSTPGAPLFGGFKSERFGNARRSLLKSCKCFSVEAWAMEEGTLGAVTCSLPPPPVSLARKVGAEFIGTLILIFAGTATGIVNQKTQGSETLLGLAASTGLAVMIVILSTGHISGAHLNPSVTIAFAALKHFPWKQVPVYIAAQVMASICAAFALKGIFHPFMGGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAGWSYCYAKHTNCRGNNRSIHEPCKNFGTSHSCKQLQGHLGLPHCPNPRRTLWSRCLLSC* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01278 283 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl09g01278 283 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl09g01278 283 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl09g01278 283 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl09g01278 283 MobiDBLite consensus disorder prediction 1 15 - -
Eupl09g01278 283 Gene3D Glycerol uptake facilitator protein. 70 253 IPR023271 -
Eupl09g01278 283 MobiDBLite consensus disorder prediction 1 22 - -
Eupl09g01278 283 Pfam Major intrinsic protein 72 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl09g01278 283 PANTHER AQUAPORIN NIP2-1 40 224 IPR034294 -
Eupl09g01278 283 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Eupl09g01278 283 SUPERFAMILY Aquaporin-like 73 229 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01278 Eupl-Chr9 25467583 25472564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01278 1 224 Major Intrinsic Protein MIP AT1G80760 77.826 2.95e-116 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01278 K09874 - ming:122071722 373.244