Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01267 ATGCAGCCTTGCAGTAGAGAAATGCAAGGAGTGGCACGCTTGAGTCCATCTCAAATTGCTCTTCAAGAGCTTCAAAACGGTCAACAACAGCATCAACAACAACAGATCACAAATTCTCAGATTCAGGTTCAGGGTTCACACTTCGATCATTCCACTCACGACGATATTTTCGATCAAATGCTTTCTAATCTCCCTTCCTGGCCTGAGCTCCCTGTAAACCCTAAATCTCCTTGGGACCCTAATCCCCAAAACCCTAACTGCAACACCACTTCCACCACCACTACCAACAACAACAACAACCAGAAGCTCTTCAACATCCCAATTGGTAACACTAAAGGGAGAGATTTATCGGAAGATCCGTCTCCGTCACAGCCGGAGAACCACCACTACCTGTACGATGAGTCTACACTACTTGCTTCACGGCTCCGGCAGCACCAGATAAGCGGAAATTCTCCAAAATCGATGCTGCTTCAGCAACACTTGCTCCTTTCGAGAGGTGACGGTGGCAGCATCAGCATGGGAAGAACGCCGTCGTCATGCGGAGAGTCAGGTTTTCTCCCACTCCCTCTAACCCTAGGAAGCGGCGATTCCTCCGATTCTCGTCTCCTTGTCGACCGATCCCGCGACGATGTCGTCGACGCTTCCTTCAAATCCCCCAACCCCAATGGAGAAGGTTCGGTTCAAAGTCTTTACAACGGATACACAAATCAAACAGCAAACCAGCATTTCCACCTCCCCCAGACTGGATCTATTTCGACTCAAAATTACGGAGCTCCAGCAACCGGAATGAACCAAGCTCCGGCAGTAGGACCGGGCGGAGGTGGTGGGGCACCGCCAGCTAGGCAGAGAGTGAGGGCAAGGAGAGGTCAGGCGACGGATCCACACAGCATCGCTGAAAGATTACGAAGGGAAAGAATCGCAGAAAGAATGAAAGCTCTGCAGGAACTGGTGCCTAATGCCAATAAGACGGACAAGGCATCGATGCTGGACGAGATCATCGACTATGTCAAATTCCTCCAGCTTCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGTGGTGCAGCTGCTGTTGCTCCCCTCGTGGCTGATATCTCCTCTGAGGGAGGTGGTGACTGTATTCAAGCGAGTGGAGGTGGAGTGGGACGGAACACTAACGGAACACAGACGGCGTCATCTAATGATAGTTTAACGGTGACGGAGCACCAGGTCGCGAAGCTAATGGAAGAGGACATGGGTTCGGCTATGCAGTATCTTCAAGGGAAGGGTCTCTGTCTCATGCCCATTTCCCTTGCAACTGCCATCTCAACCGCTACTTGTCACTCCAGGAACCCTAAGAACAACCCTCTCCTCGGTTCCAATGCTGATGGTCCTTCCTCTCCCAGCATGTCTGTCCTGACTGTACAGTCAGCCACGATGGGTAACGGCATCGTTGGAGGGGAGACTTCTGTCAAGGACGCGACGTCCGTTTCCAAGCCATGA 1479 0.5172 MQPCSREMQGVARLSPSQIALQELQNGQQQHQQQQITNSQIQVQGSHFDHSTHDDIFDQMLSNLPSWPELPVNPKSPWDPNPQNPNCNTTSTTTTNNNNNQKLFNIPIGNTKGRDLSEDPSPSQPENHHYLYDESTLLASRLRQHQISGNSPKSMLLQQHLLLSRGDGGSISMGRTPSSCGESGFLPLPLTLGSGDSSDSRLLVDRSRDDVVDASFKSPNPNGEGSVQSLYNGYTNQTANQHFHLPQTGSISTQNYGAPATGMNQAPAVGPGGGGGAPPARQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDCIQASGGGVGRNTNGTQTASSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPKNNPLLGSNADGPSSPSMSVLTVQSATMGNGIVGGETSVKDATSVSKP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01267 492 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 339 IPR011598 GO:0046983
Eupl09g01267 492 FunFam Transcription factor bHLH66 287 352 - -
Eupl09g01267 492 MobiDBLite consensus disorder prediction 473 492 - -
Eupl09g01267 492 SMART finulus 296 345 IPR011598 GO:0046983
Eupl09g01267 492 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 134 434 - -
Eupl09g01267 492 Pfam Helix-loop-helix DNA-binding domain 295 340 IPR011598 GO:0046983
Eupl09g01267 492 Gene3D - 285 347 IPR036638 GO:0046983
Eupl09g01267 492 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 288 350 IPR036638 GO:0046983
Eupl09g01267 492 MobiDBLite consensus disorder prediction 82 107 - -
Eupl09g01267 492 MobiDBLite consensus disorder prediction 442 462 - -
Eupl09g01267 492 MobiDBLite consensus disorder prediction 63 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01267 Eupl-Chr9 25247405 25251176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01267 272 491 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 68.644 1.17e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl09g01267 HLH 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01267 - - nnu:104610713 603.208