Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01258 ATGAGACTAAACTCCTCTCTGAAAGAGAAAGAGAGGAAGATTATCCACTTGCTAGCCTCTGATCTCAAAGTGCAAGCTCTGGAAGCGGAGTTAAAGCGTTTAAGAAATGAGAATGAAACGCTTAGACTAACGCTTGAGGTTGTGAGCAGTAACTACAACACACTTCTAGCTCGGTTGCAAGGGATGAAGTTTCAGGAAATGGGTACGGAGAGTTGCTCAAGCAAGGAGTCGAACAAGAGAGCGAGGAATAATGAAACTCCGAAGGCCAAGGCTTCACAAATTTTTGTTAGAACTGATGCAAGCGACAATAGCTTAATAGTGAAAGATGGGTTTCAATGGAGGAAGTATGGACAAAAGGTTACTAAAGATAATCCATCACCTCGAGCTTATTACAGATGTTCCATGGCTCCAGGATGTCCAGTCAAGAAGAAGGTGCAAAGATGCTTGGAGGATAAATCGATTACGGTTGCAACATATGAAGGGGAGCACAGTCATTCAATTCTTGGTGGACATAATGACTCTTCATCTTTGCCAAAAGCCTTAATAGGAGACTCAACTTCAAATTTACCATATTCCATTGCTGTTAATCATTTTCAACCAACTATCACCTTTGATCTAACTCTTTCTGGGGCCAATCAAGAGAGCAAGATACCTTGTCACAATTTCATGGAAGATGACGGCGGCGACGACAACAACAACAACAACATTGAAGAATATGTGGCTTCTCTAGCAAAAGACCCTAACTTCACTGCAACTTTGGCAGCTGCAGTGGCACGCACCATCACACACCTTCCGCATCCAACCAAGATATGA 813 0.4268 MRLNSSLKEKERKIIHLLASDLKVQALEAELKRLRNENETLRLTLEVVSSNYNTLLARLQGMKFQEMGTESCSSKESNKRARNNETPKAKASQIFVRTDASDNSLIVKDGFQWRKYGQKVTKDNPSPRAYYRCSMAPGCPVKKKVQRCLEDKSITVATYEGEHSHSILGGHNDSSSLPKALIGDSTSNLPYSIAVNHFQPTITFDLTLSGANQESKIPCHNFMEDDGGDDNNNNNIEEYVASLAKDPNFTATLAAAVARTITHLPHPTKI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01258 270 Gene3D WRKY domain 90 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g01258 270 SMART WRKY_cls 107 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01258 270 ProSiteProfiles WRKY domain profile. 102 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01258 270 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 261 IPR044810 GO:0003700
Eupl09g01258 270 SUPERFAMILY WRKY DNA-binding domain 104 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g01258 270 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01258 270 MobiDBLite consensus disorder prediction 70 90 - -
Eupl09g01258 270 Coils Coil 17 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01258 Eupl-Chr9 24821159 24822606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01258 21 269 WRKY Transcription Factor Family AT1G80840 35.587 2.43e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl09g01258 WRKY 4.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01258 - - nnu:104603311 261.536