Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01252 ATGATTTCCAGACCTTTTACCCAAATGGGTTTCGGTTTCTTTGCTTCCATTTTGCTTCTCACACTGTTCTTCAGGCCTTTATTTTCTCAACAACCCAATACAGATGAGTTCTTTGTCTCTGATTTCTTGAAGAAAATGGGTATAATCTCTTCAGAAGTTTACAATTTCTCTGCTCCTGTTTGTTCATGGCAAGGTGTGTTCTGTGATGCCCAACAAGAAAATGTTATTAGGTTAGTTGTTTCTGGTCTGGGTCTCTCTGGTTCAATTCCAGATACCACCATTGGGAAGCTTAGCAAGCTTCAATTTTTGGATCTGAGTAATAACAAAATTACTGGTTTGTCGTCTGATTTCTGGAGTTTGGGAAGTAGTCTCAAGACCCTTAACCTGTCTTATAACCAAATTACTGGATTCATTCCGGGCAATATCGGCAACTTCGGTGTACTAGAAAGCATCGATCTTTCCGTCAACAACTTCTCGGGTGACATTCCTGCATCTTTCAGCTCTGTTTTGAGCCTGCAAGTTCTCAAACTTGATAGAAATGAGTTTGGAGGGAGTATCCCATCTGGGATTCTGAATTGCCAAAATCTTGTGTTGATTGACATTTCATTGAATCGGCTCAATGGGACTGTTCCCGATGGTTTTGGTGCTGCATTTCCAAAGCTTAAGACTTTGAATCTTGCTGGGAATGAGATTCATGGCAGGTCTTCAGACTTCTTGGGGCTGAAATCTGTCACTTATCTTAATATTTCCGGGAATTTGTTTCAGGGTTCTGTGATGGGTGTGTTTCAGGAGCCACTGGAGGTTATCGATTTGAGCCGGAACCAATTTCAAGGTCACATCTCTCGGGTACATTTCAATTCTAGCTTCAACTGGTCTCGTTTGGTTTTCCTTGACGCGTCTGCGAATCAACTCAGTGGAGAATTCTTCCATGATTTGAATGAAGCCCAGAATCTCAAACACCTAAATCTAGCCCACAATAGATTTTCTGGACAAGAGTTCCCCCATATTGAAAAGCTTTCGAGTTTGGAATATCTGAACCTGTCCCGGACCAGTCTCACAGGGGAAATTCCCTCTGAAATCTCACAATTGGGAAGCTTAGGTACACTAGACCTTTCTGAGAACCATCTCACTGGCCGAATCCCTTATCTGGATATCAGCAATCTCCAAATTCTAGACCTTTCCCTGAACAATTTAACCGGAGAAATCCCGTCATCTCTGCTAAAAGAACTACACCAAATGGAGAGATTCAACTTTTCCTTCAACAACTTAACCCTCTGTGCTTCAGAGTTTCCCCCTGAAACCTTCAGGACTGTATTCATTGGGTTACTAGACAGCTGCCCGATTGCTGCGAACCCGAATTTCTTCAGAAGAAACACTACCAAACATAAAGGACTCAAGCTTGCTCTGGCTATAACCCTCTCAACTGTCTGTTTTCTAGCGGGGTTGCTCTGCCTAGCCTATGGGTGCAGAAGAAAAACCAAAATGTGGGCAGTAAAGCAACAATCATACAAAGAAGAACAGAACATCTCGGGCCCCTTTTCATTCCAGACGGATTCGACGACTTGGGTTGCAGATGTTAAGGTTGCAACCTCAGTCCCTGTAGTAATATTCGAGAAACCGTTGCTGAATTTCACCTTTGCAGATCTCTTGTCTGCAACTTCTCATTTTGATCGAGGGACTCTGTTGGCAGAGGGGAGATTTGGGCCAGTATATAGAGGATTCCTACCAGGGGGGATCCATGTAGCTGTAAAGGTTTTGGTCCATGTGTCCACTATAACAGACCAGGAAGTCGCAAGGGAGCTCGAATATCTGGGTCGGATCAAACACCCCAATCTTGTTCCGTTGACAGGATACTGCCTAGCTGGGGATCAGAGAATTGCCATCTACGATTACATGGAGAATGGGAATCTGCAGAATTTGCTCCACGATCTACCTCTCGGGGTCCAAACGACAGATGATTGGAGCACAGATACATGGGAAGAGGATGGTAATAATGGAATTCAAAATGTTGGTTCTGAAGGGCTGCTAACAACATGGAGATTTAGACACAAAATCGCACTCGGCACAGCCCGGGCACTGGCCTTCCTTCACCATGGTTGCTCTCCTCCCATAATTCACAGAGATGTTAAGGCTAGTAGTGTTTATCTTGATTCGAATTTGGAGCCTAGACTATCCGATTTTGGATTGGCTAATGGCCTAGATTACGAGATCTCTCGTGGGTCATCAGGGTATGTGCCACCAGAGTTTTCTGAACCAGAAACTGGTTCCCCAACACCAAGATCTGATGTTTATGGATTCGGGGTTGTTCTATTTGAGCTGATTACTGGGAAGAAACCGGTCGGAGATGATTATCCGGACGAGAAAGAATCGCACTTGGTGAGTTGGGTGAGAGGACTGGTCAGAAAGAAGCAGAGTTTGAGGGCAATTGATCCAAAGATCCGAGGGACAGGGTCAGAGACCCAAATGGAGGAGGCCCTAAGGATTGGGTATCTATGTACAGCCGATTTGCCGACAAAGAGGCCCACCATGCAACAGATAGTTGGGCTCCTGAAAGACATTGAACCTGCTGTCCATCAGTGA 2580 0.4469 MISRPFTQMGFGFFASILLLTLFFRPLFSQQPNTDEFFVSDFLKKMGIISSEVYNFSAPVCSWQGVFCDAQQENVIRLVVSGLGLSGSIPDTTIGKLSKLQFLDLSNNKITGLSSDFWSLGSSLKTLNLSYNQITGFIPGNIGNFGVLESIDLSVNNFSGDIPASFSSVLSLQVLKLDRNEFGGSIPSGILNCQNLVLIDISLNRLNGTVPDGFGAAFPKLKTLNLAGNEIHGRSSDFLGLKSVTYLNISGNLFQGSVMGVFQEPLEVIDLSRNQFQGHISRVHFNSSFNWSRLVFLDASANQLSGEFFHDLNEAQNLKHLNLAHNRFSGQEFPHIEKLSSLEYLNLSRTSLTGEIPSEISQLGSLGTLDLSENHLTGRIPYLDISNLQILDLSLNNLTGEIPSSLLKELHQMERFNFSFNNLTLCASEFPPETFRTVFIGLLDSCPIAANPNFFRRNTTKHKGLKLALAITLSTVCFLAGLLCLAYGCRRKTKMWAVKQQSYKEEQNISGPFSFQTDSTTWVADVKVATSVPVVIFEKPLLNFTFADLLSATSHFDRGTLLAEGRFGPVYRGFLPGGIHVAVKVLVHVSTITDQEVARELEYLGRIKHPNLVPLTGYCLAGDQRIAIYDYMENGNLQNLLHDLPLGVQTTDDWSTDTWEEDGNNGIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDSNLEPRLSDFGLANGLDYEISRGSSGYVPPEFSEPETGSPTPRSDVYGFGVVLFELITGKKPVGDDYPDEKESHLVSWVRGLVRKKQSLRAIDPKIRGTGSETQMEEALRIGYLCTADLPTKRPTMQQIVGLLKDIEPAVHQ* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01252 859 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 291 432 - -
Eupl09g01252 859 Pfam Protein tyrosine and serine/threonine kinase 560 848 IPR001245 GO:0004672|GO:0006468
Eupl09g01252 859 ProSiteProfiles Protein kinase domain profile. 556 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01252 859 Pfam Leucine Rich Repeat 99 116 IPR001611 GO:0005515
Eupl09g01252 859 FunFam Putative LRR receptor-like serine/threonine-protein kinase 517 631 - -
Eupl09g01252 859 SUPERFAMILY Protein kinase-like (PK-like) 533 850 IPR011009 -
Eupl09g01252 859 SUPERFAMILY L domain-like 52 437 - -
Eupl09g01252 859 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 114 210 - -
Eupl09g01252 859 ProSiteProfiles Leucine-rich repeat profile. 99 120 IPR001611 GO:0005515
Eupl09g01252 859 FunFam Calmodulin-binding receptor kinase CaMRLK 264 382 - -
Eupl09g01252 859 PRINTS Leucine-rich repeat signature 100 113 - -
Eupl09g01252 859 PRINTS Leucine-rich repeat signature 385 398 - -
Eupl09g01252 859 Gene3D Ribonuclease Inhibitor 192 283 IPR032675 -
Eupl09g01252 859 Gene3D Ribonuclease Inhibitor 284 464 IPR032675 -
Eupl09g01252 859 Gene3D Ribonuclease Inhibitor 38 190 IPR032675 -
Eupl09g01252 859 Gene3D Phosphorylase Kinase; domain 1 517 631 - -
Eupl09g01252 859 Gene3D Transferase(Phosphotransferase) domain 1 632 858 - -
Eupl09g01252 859 Pfam Leucine rich repeat 195 253 IPR001611 GO:0005515
Eupl09g01252 859 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Eupl09g01252 859 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Eupl09g01252 859 Pfam Leucine Rich repeat 386 401 IPR001611 GO:0005515
Eupl09g01252 859 SMART LRR_typ_2 169 193 IPR003591 -
Eupl09g01252 859 SMART LRR_typ_2 410 437 IPR003591 -
Eupl09g01252 859 SMART LRR_typ_2 218 241 IPR003591 -
Eupl09g01252 859 SMART LRR_typ_2 385 409 IPR003591 -
Eupl09g01252 859 SMART LRR_typ_2 97 120 IPR003591 -
Eupl09g01252 859 SMART LRR_typ_2 339 363 IPR003591 -
Eupl09g01252 859 SMART LRR_typ_2 122 145 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01252 Eupl-Chr9 24707176 24710508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01252 74 854 Receptor kinase-like Gene Family AT4G39400 33.909 1.46e-114 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Eupl09g01252 PK_Tyr_Ser-Thr 3.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01252 - - nnu:104603301 1406.35