Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01248 ATGGCTTCTCCTGCGGCGAATTCTCCGCCTGTCGGAGGATTGGATATGAAGCCGACGATTTCTACTCCGCCGGCGTCGCTTGACCCTGCAGGATTCAAGGGGCAATTTGGGATGTCCCATCAAGAAGTCTTAGCGAGTGTAACAGCTCAAGCTCAGGCCCAGATGGAGCTTCAGGCTGGGTATCTGCCTTCCTCATCGGAATTATCTCCTGTTTCTGTTATACAATCCACGTCACCTGCGATAAGCTCTGCTCCACCACAACAAGGATTGATACCAGTACACCAGGATAATAATGTCTGTACACCAGAAGTTAACCGGCAGAATTCCTCTGACCGGAAAACTAAACCTGCTCATGCTATTGTGAAGACACCCCCTACTGATGGATACAACTGGCGAAAGTACGGTCAGAAGCAGGTGAAGAGTAATGAGAGTTCTCGAAGCTATTACAGATGCACGTTCGTTAATTGTCACGCTAAGAAGAAGGTTGAACGTTGTGATCACTCTGGTCGTGTGATCGAGATTATTTATAAAGGTCGGCACAATCATGACCCACCTCGAAAGATTAGATGCACTAAAACGAGTAGGTTTGTATCGTCTGCTGGGCCTGGGGGAGGGAGTGGAACCATAGATAATCGAGTAATAAAACTAAACGATTCTGATCCATCTACATCTAGGCGAGAACCTAGACATGCTACACCAGGACAGCAACTACATAGCTCAATCAAGCGTGATGGGGATGCTGGTGTTAGGGCTGAGGAGGAGCATGGCGATGAACCGGATCCAAAACGAAGGATGAAGGAAAGCAGTGCAGCATATTCGTCCCCTCTATTTAAAACAGCTAAGGAGCCTAAAATTGTTGTGCAAGCGGCCAGTGATGTAGGAATCTCAGGTGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCTAATCCCAGGAGCTACTACAAATGCACATCTGCTGGATGCCCTGTCCGTAAGCATGTTGAAAGGTCTATAGATGACACAACAGCCATAATAATTACATATGAGGGGAAACATGACCATGACATGCCAGTCCCCAAGAAGCGCCACGGTCCACCAAGTGCTGCTCTACTTATTGCTGCTGCTGCTGCCATGAATAGTGCACAATTAAAGAAATCTGGTACATCAAATAACCGAAAACCTTCAATCCAATGGTCAATGGACATGGAAGGAGAATTGGCAGGTGAGAAGGCATTGGAACTTGGAGGTGAGAAGGCGCTGGAATCAGCTCGAACTCTTCTGAGCATTGGAATTGAACTCAAACCTTACTGA 1308 0.4732 MASPAANSPPVGGLDMKPTISTPPASLDPAGFKGQFGMSHQEVLASVTAQAQAQMELQAGYLPSSSELSPVSVIQSTSPAISSAPPQQGLIPVHQDNNVCTPEVNRQNSSDRKTKPAHAIVKTPPTDGYNWRKYGQKQVKSNESSRSYYRCTFVNCHAKKKVERCDHSGRVIEIIYKGRHNHDPPRKIRCTKTSRFVSSAGPGGGSGTIDNRVIKLNDSDPSTSRREPRHATPGQQLHSSIKRDGDAGVRAEEEHGDEPDPKRRMKESSAAYSSPLFKTAKEPKIVVQAASDVGISGDGYRWRKYGQKMVKGNPNPRSYYKCTSAGCPVRKHVERSIDDTTAIIITYEGKHDHDMPVPKKRHGPPSAALLIAAAAAMNSAQLKKSGTSNNRKPSIQWSMDMEGELAGEKALELGGEKALESARTLLSIGIELKPY* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01248 435 ProSiteProfiles WRKY domain profile. 126 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 MobiDBLite consensus disorder prediction 243 267 - -
Eupl09g01248 435 FunFam WRKY transcription factor 107 186 - -
Eupl09g01248 435 MobiDBLite consensus disorder prediction 104 132 - -
Eupl09g01248 435 MobiDBLite consensus disorder prediction 1 34 - -
Eupl09g01248 435 SMART WRKY_cls 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 SMART WRKY_cls 296 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 SUPERFAMILY WRKY DNA-binding domain 123 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 SUPERFAMILY WRKY DNA-binding domain 290 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 Gene3D WRKY domain 281 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 Gene3D WRKY domain 114 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 FunFam WRKY transcription factor 282 357 - -
Eupl09g01248 435 Pfam WRKY DNA -binding domain 127 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 Pfam WRKY DNA -binding domain 298 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 ProSiteProfiles WRKY domain profile. 291 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g01248 435 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 386 IPR044810 GO:0003700
Eupl09g01248 435 MobiDBLite consensus disorder prediction 194 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01248 Eupl-Chr9 24641814 24653864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01248 62 433 WRKY Transcription Factor Family AT4G30935 46.982 1.24e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl09g01248 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01248 - - ming:122084578 583.178