Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01238 ATGCCTTCTAGAACCTTCCCTCCACCCCCAAACCCTAATTCGGTTCTTAGGGCTAGAGTTTTGTTCCTCGCTCTAACCATCTCAGCTTCCGCTCTCCTCCTCCTTGCTCTCCTCATCTTTCTCTTCTACCTCTACAACTCCCTCGTCAATCGCTCTCGCACCAGTCCTTTCGATTCAAGTGCGCCATTGAAGTTGCAGAGATTTTCTTACAGAGAACTCAAATCTGCGACAAATGTGTTTAGCGAAGCAAACTCTATCGGAAAAGGTGGCTCCGGGACTGTGTTCCGTGGTATTCTCCGTGATGGGAAGTCCGTCGCTGTTAAGAAGCTCGACGCTTCATCTTTGCAAGCTGAACGAGAGTTCCAGAACGAGTTGCAGATCCTTGGAGGTCTGCGATCGCCGTTCGTAGTCTCGCTTTTGGGGTTTTGTGTTGAGAAGAAGAAGAGGTTTCTGGTTTATGAGTACATGCCTAATCGGAGCTTGCAGGAATTGTTATTTGGAGAGGGACCAGCGGCGCCGGATTTGAATTGGGATCGGCGGTTCGAGATTATACTTGATATTACTCGAGCTCTGGCGTTTCTGCATCTTGAATGCGATCCGCCGGTCATTCATGGTGATGTAAAGCCGAGCAATGTTTTATTGGGTTCAGATTATCGGGCCAAGATTTCGGATTTCGGGTTGTCCAGGATTAAAACGGAAGGCGAATTCGCAGTTGATTTGTTCAGTCAGGAATTGGGTCGGAGTCAGGAGCTCTGGAAAAGCCAAGAACTTTCAGGGAATCTGGCGGCCATTGTTCCTGCAGAAACTCCAGTGGAGAGTAGTACTCCTCCTGAGGTAGATTTCGCATTTGCTTTACAAGCTTCATCTTCTTTTTCTTCTAAGAACAATAGAGTAGATTACACTGTAAAAACCTTGCACTTGAATTCTTTGAATTACATTGGCAATGGGACAAGTGAGGATGATCCAAAGGGTAGTAATCTAAAGGGAAGGGTGTCTTGGCCGGTGATACCGGCGGAGGAATTTGGAACAAGTTCGTTCCTTATGATGATGAGCTCTGTAGTATTGATCACAGTAAGGAGTTGA 1083 0.4681 MPSRTFPPPPNPNSVLRARVLFLALTISASALLLLALLIFLFYLYNSLVNRSRTSPFDSSAPLKLQRFSYRELKSATNVFSEANSIGKGGSGTVFRGILRDGKSVAVKKLDASSLQAEREFQNELQILGGLRSPFVVSLLGFCVEKKKRFLVYEYMPNRSLQELLFGEGPAAPDLNWDRRFEIILDITRALAFLHLECDPPVIHGDVKPSNVLLGSDYRAKISDFGLSRIKTEGEFAVDLFSQELGRSQELWKSQELSGNLAAIVPAETPVESSTPPEVDFAFALQASSSFSSKNNRVDYTVKTLHLNSLNYIGNGTSEDDPKGSNLKGRVSWPVIPAEEFGTSSFLMMMSSVVLITVRS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01238 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Eupl09g01238 360 FunFam Os07g0541700 protein 156 243 - -
Eupl09g01238 360 Gene3D Transferase(Phosphotransferase) domain 1 156 276 - -
Eupl09g01238 360 SMART serkin_6 80 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01238 360 FunFam Receptor-like serine/threonine-protein kinase At4g25390 49 155 - -
Eupl09g01238 360 PANTHER OS07G0586332 PROTEIN 8 251 IPR044576 -
Eupl09g01238 360 Pfam Protein kinase domain 81 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01238 360 SUPERFAMILY Protein kinase-like (PK-like) 54 236 IPR011009 -
Eupl09g01238 360 ProSiteProfiles Protein kinase domain profile. 80 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01238 360 Gene3D Phosphorylase Kinase; domain 1 53 155 - -
Eupl09g01238 360 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01238 Eupl-Chr9 24499166 24500248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01238 17 233 Receptor kinase-like Gene Family AT3G58690 37.179 2.96e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Eupl09g01238 Pkinase 4.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01238 - - nnu:104603270 460.299