Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01232 ATGGCGGACCTCAAAGAACGCCTACTCCCGCCAAAACCCTCGTCCTCTACGAACTCTAGAGAAGCGTCTTCTCGGCCTTCCGCATCCGGGCGCCCGCTTTTTCAGGGCATGGACTTTCTAGGGCTGAAGAAGCGGGGTCAAGGCCTCCGATCATGGATTCGTGTCGACGCGTCTGGTAATTCTCAGATCATGGAGGTCGACAAGTTCACCATGATGCGGCGCTGCGACCTCCCCGCCCGCGACCTCCGCCTTCTGGATCCCCTCTTCGTCTACCCTTCCACGATCCTCGGCAGAGAGAAGGCCATCGTCGTAAACCTAGAGCAGATTCGATGCATAATCACTGCCGATGAGGTTTTGCTATTGAATTCGCTCGATAGCTACGTATTGCAGTATGTGGTGGAGCTGCAGCGGCGACTGACGACTGACGGTGCTGAGTTGAACCGGAGGAGAGGAGGTAGGGGTTTTGATAACGTGATGTTCGGGAACACGTCGCCGGATTATCTGCCGTTCGAATTTAGGGCGCTCGAAGTGGCACTGGAGGCCGCTTGTACATTTCTCGATGCTCAGGCAGCAGATTTAGAAATTGAAGCGTATCCATTATTAGATGAGCTGACAGCAAAGATCAGTACCTTAAATTTGGAACGTGTGCGTCGGTTGAAGAGCAGACTTGTCGCTTTGACTCGGAGAGTTCAAAAGGTTAGGGATGAGATAGAGCAGCTAATGGATGATGATGGAGATATGGCAGAAATGTATCTCACTGAGAAGAAGCAACGCATGGAGTCATATATTTATGGTGATCAGTCTTTGGTGGGATACAACTCGACTGGGGGTGGATTATCTGTCTCGGCTCCAGTTTCTCCCGTTTCTTCACCCCCTGATACCCGAAAACTCGAGAAGAGTTTGAGCATCGCAAGGAGCAGACACGAGAGCATGAAGAGTTCAGACAGCACTAACGAGAACATAGAAGAGTTGGAGATGCTGTTGGAAGCGTACTTTGTGGTCATTGATAGTACCCTCAACAAACTGACATCGCTGAAGGAGTACATTGATGACACAGAAGATTTCATCAACATTCAGCTGGACAACGTTCGAAACCAGCTGATCCAATTTGAACTGCTACTTACAACTGCAACATTCGTCGTTGCAATCTTCGGGGTGGTCGCAGGTGTGTTTGGAATGAACTTCTCGGTACCATTATTTGACGACCCGAGTGCATTCAAGTGGGTTCTTATAATAACAGGAATATGTGGAACTGTTGTATTTTGTTCATTTTTATGGTTTTTCAAGTATAGAAGGCTTATGCCTTTGTAG 1311 0.4889 MADLKERLLPPKPSSSTNSREASSRPSASGRPLFQGMDFLGLKKRGQGLRSWIRVDASGNSQIMEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTTDGAELNRRRGGRGFDNVMFGNTSPDYLPFEFRALEVALEAACTFLDAQAADLEIEAYPLLDELTAKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKQRMESYIYGDQSLVGYNSTGGGLSVSAPVSPVSSPPDTRKLEKSLSIARSRHESMKSSDSTNENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFSVPLFDDPSAFKWVLIITGICGTVVFCSFLWFFKYRRLMPL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01232 436 CDD Mrs2_Mfm1p-like 52 433 IPR039204 -
Eupl09g01232 436 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 12 434 IPR039204 -
Eupl09g01232 436 Pfam CorA-like Mg2+ transporter protein 311 427 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Eupl09g01232 436 MobiDBLite consensus disorder prediction 11 30 - -
Eupl09g01232 436 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 373 426 IPR045863 -
Eupl09g01232 436 Gene3D - 40 122 - -
Eupl09g01232 436 FunFam Magnesium transporter MRS2-1 374 434 - -
Eupl09g01232 436 FunFam Magnesium transporter MRS2-1 40 123 - -
Eupl09g01232 436 MobiDBLite consensus disorder prediction 1 34 - -
Eupl09g01232 436 Gene3D Magnesium transport protein CorA, transmembrane region 374 434 - -
Eupl09g01232 436 Coils Coil 216 243 - -
Eupl09g01232 436 Gene3D Magnesium transport protein CorA, transmembrane region 123 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01232 Eupl-Chr9 24442864 24453256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01232 1 436 MRS2 Gene Family AT1G16010 80.899 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01232 K16075 - vvi:100267379 706.827