Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01231 ATGGCAAGCCAAAGGAACACCTTCTTCTTATTTTTATTCTTCTCTTTGATTGGTGATATCATTGGTGCTACAACCAATCAACGAATGCTCGATCGAATCTCCATTCTCCCCGGACAACCGCCCGTGTCGTTCTTGCAGTTCTCCGGCTACGTTACCGTTAACGAACGACGTGGTCGAGCTCTCTTCTACTGGTTAACAGAGGCTACTACTCAACCCGAGAGAAAGCCTCTTGTGCTTTGGCTCAATGGAGGACCAGGTTGTTCATCGATTGCATACGGAGCTTCGGAAGAAATCGGACCGTTTTATGTCAACAAAACCGGCTCATCTCTTTATCTCAACAAATACTCCTGGAATAAAGATGCAAATATTCTCTTTCTCGAATCACCAGCTGGTGTCGGTTTCTCATATTCAAATACGAGCTCCGATCTTAAAGATTCAGGCGACAAACGCACGGCTCAAGACGCTCTAATTTTTATGATAAAATGGATATCAAGGTTTCCCCAATACAAATATAGAGATTTCTACATCTCTGGGGAGAGCTATGCAGGACATTACGTCCCGCAATTGGCGAAGAAAATCCATGATTACAATAAAGCTTATTCCAAGCCCTTCATCAACCTTAAGGGGTTCCTTGTGGGGAACGCCGTAACCGATAACTACTACGACAGTATCGGGACGGTGACATACTGGTGGAGCCATTCGATGATATCAGATAAGACATATCGATCCATCCTATCTCTATGCAATTTTACGGCATCCAATAGCTCTCCGTCATGCGATCTTGCTGTTAGTTATGCCATGAACCATGAGTTCGGCGACATTGATCAATACAGTATCTACACGCCGTCATGTATGCCCGTATCAACGAAAACTACGGGATCGATCAGGCTCAAGAACACACTCCTGCGTCGGCGTGTTTACGGGTATGATCCGTGTACGGAGAATTATGCAGAGAAATACTATAACAGGCCTGATGTGCAGAAGGCCATGCATGCAAATTCTACCGGCATTCCATACAAGTGGACTGCTTGCAGTGATGTTCTTATAAAGAACTGGATGGATTCTGAGTTTTCTATGTTACCTACATACAAGGAGCTGATTGCTGCTGGCCTCAGGATCTGGGTTTTTAGTGGCGACACAGATTCAGTGGTTCCAGTTACTGCCACTAGGTTCTCTCTCAACCATCTCAACCTCACTGTGAAAACCCGATGGTATCCGTGGTACACGGGCAGGCAGGTTGCGGGATGGACGGAGGTTTACGAAGGGCTAACCTTTGCAACGGTAAGAGGAGCCGGCCACGAGGTTCCACTCTTCCAGCCGAAACGGGCATTTACTCTTTTTCGAGCGTTCTTGGCTGGCAAAGAATTACCAAAATCGTAA 1380 0.4609 MASQRNTFFLFLFFSLIGDIIGATTNQRMLDRISILPGQPPVSFLQFSGYVTVNERRGRALFYWLTEATTQPERKPLVLWLNGGPGCSSIAYGASEEIGPFYVNKTGSSLYLNKYSWNKDANILFLESPAGVGFSYSNTSSDLKDSGDKRTAQDALIFMIKWISRFPQYKYRDFYISGESYAGHYVPQLAKKIHDYNKAYSKPFINLKGFLVGNAVTDNYYDSIGTVTYWWSHSMISDKTYRSILSLCNFTASNSSPSCDLAVSYAMNHEFGDIDQYSIYTPSCMPVSTKTTGSIRLKNTLLRRRVYGYDPCTENYAEKYYNRPDVQKAMHANSTGIPYKWTACSDVLIKNWMDSEFSMLPTYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTVKTRWYPWYTGRQVAGWTEVYEGLTFATVRGAGHEVPLFQPKRAFTLFRAFLAGKELPKS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01231 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Eupl09g01231 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Eupl09g01231 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Eupl09g01231 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Eupl09g01231 459 FunFam Carboxypeptidase 27 286 - -
Eupl09g01231 459 Pfam Serine carboxypeptidase 38 452 IPR001563 GO:0004185|GO:0006508
Eupl09g01231 459 Gene3D alpha/beta hydrolase 28 285 IPR029058 -
Eupl09g01231 459 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Eupl09g01231 459 SUPERFAMILY alpha/beta-Hydrolases 39 456 IPR029058 -
Eupl09g01231 459 Gene3D - 359 453 - -
Eupl09g01231 459 FunFam Carboxypeptidase 359 453 - -
Eupl09g01231 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 440 IPR001563 GO:0004185|GO:0006508
Eupl09g01231 459 Gene3D - 312 348 - -
Eupl09g01231 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01231 Eupl-Chr9 24411167 24423518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01231 317 456 Calmodulin-binding Proteins AT2G22960 29.787 1.26e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01231 K16297 - msin:131256943 792.727