Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01225 ATGGAATTCAGATTTCGAGCAGACGACGATAGGAATTCTACGTATTTCTCTTCTTCCTCGAGCGATAGCTATTTCACTGAACAAGCATTGCGTGCGGGTTTTATAAGCAATGACATCAGAAGAACTGGTTCTGTGACGAATCCGGATCCTATAAGAGAAAAGATTCAACGGGAACTTGAGAAAGAGAGAATTAGAGAAGAGATCATTGCCTCAGAGATCCTCCGTAAGCGAACACTCGAGGCGGAGGTGAGGAGAGAACTGGCGATGGAGCGAGATTTAGCACTCCGACGGGCAGAGGGGTTTTCGTTGGTGGCGACTTCATCGGCGCCGTCAATGTGGTCCGAGCCGAGGGTCTCTCTGTTACATCGTTCGGATGGTTCTAGGTTCGAAGAGAGGTTGTTGTCTTTTTCGGCTCACCCGGAAGTTGGAGGCTTTGAAAGGTTGCCGTTTCAGCGCCATCCGGAGGCGGCTAGGGTGACCGAGGTTAGCAAGGGACAAGTTATGCTCTTGGCTAAGCCCATGAGTTCTAATCTTGCTGGGACAAAGAGGAAAGTAGTGGCAGCAGCAGCAGCAGCAGGAGCAAGTGAGCTCGCTATAGTTGGTTCGAAGAAAAAACCCAACAATGAGTGGAGTTGCGCTCTCTGTCAAGTGAGTGCCACGTGTGAACAAGGTCTGAATGACCACCTCCAAGGGAAGAAGCACAAAGCCAAGGAGGCAGAGATGAGAGCGAGTAGAGCGGCAAGCAAGCACCCTGGCAGCTCCACTCCATTGTCGAAGAAAACTGATAAGCCCACAAAACTCACAAAGATCAATAGCAGCCCAAACCTGAAGCATGGGAAAAAACAGGAAGAGAAACCAGTGCAGACGAAGCAGCAGCAGGTCAGGAGAAATGGGGAGGTACCAGTGCAGAAAAAGCAGAAGACAGAAGATTTGAAGAAGAGAAGATTTAAAATATGGTGTGAACATTGTCAAATAGGGTGCCACAGTGAAACTGTAATGGCTGCTCACCGAACAGGTAAGAAGCACATGGCCCGGGTAGAGTCAGTGAAGCAAAATGGTGGAGCTGTTCTTGAAAAAGCAGAAGATGAAGCTGAAGAGGCGAATGAGGAAGCAATGGAAAATGCTGATGGGGAAGTAGATGGAGTGGAGGAAGCAGAGGAGGCAGCTGGAAGAATGGTCTCACTGGTGGATGAGTTGGCAGAAGTCGAGGCAAATGCTGAACTGGAAGATGACTTAGTAGAACCATAG 1248 0.4912 MEFRFRADDDRNSTYFSSSSSDSYFTEQALRAGFISNDIRRTGSVTNPDPIREKIQRELEKERIREEIIASEILRKRTLEAEVRRELAMERDLALRRAEGFSLVATSSAPSMWSEPRVSLLHRSDGSRFEERLLSFSAHPEVGGFERLPFQRHPEAARVTEVSKGQVMLLAKPMSSNLAGTKRKVVAAAAAAGASELAIVGSKKKPNNEWSCALCQVSATCEQGLNDHLQGKKHKAKEAEMRASRAASKHPGSSTPLSKKTDKPTKLTKINSSPNLKHGKKQEEKPVQTKQQQVRRNGEVPVQKKQKTEDLKKRRFKIWCEHCQIGCHSETVMAAHRTGKKHMARVESVKQNGGAVLEKAEDEAEEANEEAMENADGEVDGVEEAEEAAGRMVSLVDELAEVEANAELEDDLVEP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01225 415 Coils Coil 350 377 - -
Eupl09g01225 415 PANTHER OS06G0651300 PROTEIN-RELATED 1 368 - -
Eupl09g01225 415 SUPERFAMILY beta-beta-alpha zinc fingers 201 242 IPR036236 -
Eupl09g01225 415 Coils Coil 385 405 - -
Eupl09g01225 415 MobiDBLite consensus disorder prediction 276 290 - -
Eupl09g01225 415 Gene3D Classic Zinc Finger 201 246 - -
Eupl09g01225 415 Gene3D Classic Zinc Finger 299 351 - -
Eupl09g01225 415 Pfam Zinc-finger of C2H2 type 210 234 - -
Eupl09g01225 415 Pfam Zinc-finger of C2H2 type 319 342 - -
Eupl09g01225 415 SUPERFAMILY beta-beta-alpha zinc fingers 312 348 IPR036236 -
Eupl09g01225 415 MobiDBLite consensus disorder prediction 248 275 - -
Eupl09g01225 415 SMART ZnF_U1_5 207 241 IPR003604 GO:0003676|GO:0008270
Eupl09g01225 415 SMART ZnF_U1_5 315 349 IPR003604 GO:0003676|GO:0008270
Eupl09g01225 415 MobiDBLite consensus disorder prediction 232 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01225 Eupl-Chr9 24346440 24350682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01225 207 347 C2H2 Transcription Factor Family AT2G19380 26.207 7.15e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01225 - - nnu:104603254 347.051